Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC138915.1-201ENST00000565427 1685 ntBASIC3.04□□□□□ -1.92
USP44Q9H0E7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.04□□□□□ -1.92
USP44Q9H0E7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP44Q9H0E7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 RNU6-715P-201ENST00000365204 103 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 Y_RNA.402-201ENST00000383972 102 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 RPS4XP7-201ENST00000406274 780 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 U3.37-201ENST00000408528 213 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 RNU6-908P-201ENST00000410160 94 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 RNU6-607P-201ENST00000411283 108 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 USP9YP27-201ENST00000418455 438 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 MTCO1P20-201ENST00000425366 358 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC009414.1-201ENST00000427200 443 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC104332.2-201ENST00000429959 156 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AL583843.1-201ENST00000456070 346 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC026436.1-201ENST00000510537 270 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 RNU6-1281P-201ENST00000516223 105 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 MTND4P7-201ENST00000523876 130 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC020895.1-201ENST00000595362 272 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AC103810.6-201ENST00000606708 136 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 uc_338.14-201ENST00000613162 166 ntBASIC3.03□□□□□ -1.92
USP44Q9H0E7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP44Q9H0E7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.03□□□□□ -1.92
USP44Q9H0E7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
USP44Q9H0E7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USP44Q9H0E7 RNU6-82P-201ENST00000363970 107 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 SNORD14B-201ENST00000364533 90 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 Y_RNA.256-201ENST00000364594 104 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 Z98749.2-208ENST00000381646 500 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 MIR518D-201ENST00000385014 87 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AL162578.1-201ENST00000406202 378 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 BTF3P7-201ENST00000407097 488 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 MTATP6P13-201ENST00000438531 667 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 SEPT14P3-201ENST00000439401 183 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 AL732372.2-207ENST00000445840 183 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 SEPT14P2-201ENST00000453405 183 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC011005.2-201ENST00000487324 359 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 RN7SL636P-201ENST00000497504 294 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 SEPT14P4-201ENST00000513445 186 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 RNA5SP401-201ENST00000515920 127 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 RNU6-1178P-201ENST00000516674 107 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 SNORD60.2-201ENST00000516883 86 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 FO082796.1-201ENST00000523795 183 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC109635.3-201ENST00000529536 185 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC092325.1-201ENST00000566449 554 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 RNU6-91P-201ENST00000607774 107 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC007014.2-201ENST00000615581 479 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC022418.1-201ENST00000624118 445 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 MIR1291-201ENST00000627649 87 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.02□□□□□ -1.93
USP44Q9H0E7 AL354685.2-201ENST00000448218 1447 ntBASIC3.02□□□□□ -1.93
USP44Q9H0E7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 MIR21-201ENST00000362134 72 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 Y_RNA.38-201ENST00000362617 102 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 SNORA75B-201ENST00000384053 137 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU6-1127P-201ENST00000384580 107 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU6-748P-201ENST00000384648 107 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 SNORA41-201ENST00000384675 132 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU6-19P-201ENST00000384718 107 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 Y_RNA.573-201ENST00000384763 105 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AL592114.1-201ENST00000403842 483 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RNU2-49P-201ENST00000410666 184 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 RPL7P10-201ENST00000417407 739 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 PTGES3P4-201ENST00000426243 356 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.01□□□□□ -1.93
USP44Q9H0E7 RPL23AP58-201ENST00000440453 469 ntBASIC3.01□□□□□ -1.93
USP44Q9H0E7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms