Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL513124.1-201ENST00000450410 614 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 FABP5P13-201ENST00000452144 328 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC010424.1-201ENST00000506336 297 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 ARL2BPP4-201ENST00000506854 471 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC117522.2-201ENST00000510049 657 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 SMURF2P1-201ENST00000514992 481 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 Y_RNA.689-201ENST00000516589 107 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 RNU7-193P-201ENST00000516723 65 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 RNU1-40P-201ENST00000516816 164 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 RNU1-97P-201ENST00000516872 164 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 PSMA3P-201ENST00000555485 635 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 NBR2-204ENST00000587322 63 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC119751.7-201ENST00000600494 245 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC009314.1-201ENST00000603871 304 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC093783.1-201ENST00000612976 329 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AC092656.1-203ENST00000624134 423 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 AP000553.5-201ENST00000641933 54 ntBASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
CCSER1Q9C0I3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 MIR412-201ENST00000362142 91 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 RNU6-166P-201ENST00000384371 107 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 MIR518D-201ENST00000385014 87 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 RPS3AP36-201ENST00000398190 775 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL355497.1-201ENST00000406262 551 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 MIR1261-201ENST00000408659 82 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 RN7SKP32-201ENST00000410167 303 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 RNU4-26P-201ENST00000410270 107 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC127391.1-201ENST00000411737 98 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL445646.1-201ENST00000431784 216 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL031667.1-201ENST00000440222 725 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 MTCO1P19-201ENST00000443487 500 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL136380.1-201ENST00000447970 162 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 MTND1P27-201ENST00000451117 902 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC105313.1-201ENST00000509121 353 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 Vault.3-201ENST00000516676 95 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 SNORA18.6-201ENST00000516792 115 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC022616.3-201ENST00000523940 148 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC118273.2-201ENST00000532092 465 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC040904.1-201ENST00000590850 223 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL022154.1-201ENST00000604698 785 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL355297.2-201ENST00000604792 129 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 RN7SKP299-201ENST00000606679 301 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AL133173.2-201ENST00000614270 90 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC009090.3-201ENST00000616553 565 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 AC110994.2-201ENST00000635481 492 ntBASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCSER1Q9C0I3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 Y_RNA.201-201ENST00000364052 96 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 RNY1P12-201ENST00000364251 105 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 SNORA20.2-201ENST00000383922 131 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 SNORA75-201ENST00000384158 137 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 RNU2-2P-201ENST00000410396 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 ISCA1P6-201ENST00000427740 390 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC027124.2-201ENST00000428249 105 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC073614.1-201ENST00000438690 650 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC244505.5-201ENST00000443639 207 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 snoU13.15-201ENST00000459407 104 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 ADI1P3-201ENST00000549509 470 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 RSL24D1P11-201ENST00000591045 491 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC064872.1-201ENST00000604823 1072 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AC109347.2-201ENST00000610220 349 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.15-201ENST00000611544 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.16-201ENST00000613119 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 AL161423.1-201ENST00000613700 262 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.12-201ENST00000613778 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.20-201ENST00000613956 192 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.9-201ENST00000615427 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.11-201ENST00000616345 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.2-201ENST00000616535 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U2.3-201ENST00000617785 191 ntBASIC2.27□□□□□ -2.05
CCSER1Q9C0I3 U6.42-201ENST00000618440 107 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms