Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.34□□□□□ -1.87
VRK1Q99986 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK1Q99986 SUB1P3-201ENST00000564581 315 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 AP001836.1-201ENST00000604675 523 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 BRDTP1-201ENST00000605735 677 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 MIR3529-201ENST00000637713 78 ntBASIC3.34□□□□□ -1.87
VRK1Q99986 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
VRK1Q99986 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.34□□□□□ -1.87
VRK1Q99986 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VRK1Q99986 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
VRK1Q99986 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
VRK1Q99986 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VRK1Q99986 Y_RNA.28-201ENST00000362554 111 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 Y_RNA.31-201ENST00000362574 102 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 U3.6-201ENST00000363622 211 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK1Q99986 RNU6-784P-201ENST00000384330 106 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 RNU6-843P-201ENST00000384454 104 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VRK1Q99986 snosnR66.1-201ENST00000391095 99 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VRK1Q99986 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.33□□□□□ -1.88
VRK1Q99986 AC096649.2-201ENST00000416186 393 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 MTND3P9-201ENST00000429526 346 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 RPL23AP50-201ENST00000434149 455 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VRK1Q99986 HMGB1P37-201ENST00000439613 609 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AC243964.1-201ENST00000441814 261 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AL035666.1-201ENST00000446195 348 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.33□□□□□ -1.88
VRK1Q99986 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK1Q99986 MED28P2-201ENST00000475771 317 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AC068781.1-201ENST00000488231 618 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AC022447.4-201ENST00000504053 364 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK1Q99986 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK1Q99986 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK1Q99986 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.33□□□□□ -1.88
VRK1Q99986 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK1Q99986 ACA59.2-201ENST00000517061 156 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VRK1Q99986 AC022695.1-201ENST00000522089 237 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AL356157.2-201ENST00000605122 111 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 PART1_1.1-201ENST00000611761 217 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 RNVU1-4-201ENST00000612985 164 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK1Q99986 AC024581.2-201ENST00000619986 252 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AC091925.1-201ENST00000623204 462 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 AC241585.2-209ENST00000638217 143 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.33□□□□□ -1.88
VRK1Q99986 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VRK1Q99986 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VRK1Q99986 AC004944.1-201ENST00000517807 3059 ntBASIC3.33□□□□□ -1.88
VRK1Q99986 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.33□□□□□ -1.88
VRK1Q99986 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
VRK1Q99986 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
VRK1Q99986 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VRK1Q99986 MAPK10-322ENST00000641485 4530 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 AL079305.1-201ENST00000623159 3008 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
VRK1Q99986 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VRK1Q99986 SNORA14A-201ENST00000364773 135 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 RNU6-487P-201ENST00000365430 104 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 RNU6-692P-201ENST00000384496 107 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 RNU6-1245P-201ENST00000411130 106 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 AC096664.2-201ENST00000411843 406 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK1Q99986 AL139247.1-201ENST00000422768 325 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK1Q99986 AC007969.2-201ENST00000441891 191 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.32□□□□□ -1.88
VRK1Q99986 RPL17P19-201ENST00000489069 552 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.32□□□□□ -1.88
VRK1Q99986 RN7SKP83-201ENST00000516512 178 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 RN7SKP209-201ENST00000516888 304 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 SNORA31.23-201ENST00000517219 133 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 RNU6-988P-201ENST00000519081 107 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 AC007991.1-201ENST00000522680 631 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 AP000889.1-201ENST00000530968 660 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 CBX3P8-201ENST00000532412 525 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK1Q99986 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK1Q99986 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.32□□□□□ -1.88
VRK1Q99986 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
VRK1Q99986 AC005034.5-201ENST00000604219 466 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 AC091152.3-201ENST00000604227 325 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.32□□□□□ -1.88
VRK1Q99986 MTND5P9-201ENST00000503854 1755 ntBASIC3.32□□□□□ -1.88
VRK1Q99986 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
VRK1Q99986 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VRK1Q99986 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.31□□□□□ -1.88
VRK1Q99986 AC007256.1-201ENST00000392253 2765 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
VRK1Q99986 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VRK1Q99986 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VRK1Q99986 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VRK1Q99986 RNU6-858P-201ENST00000362436 107 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 SNORD50.1-201ENST00000362987 71 ntBASIC3.31□□□□□ -1.88
VRK1Q99986 Y_RNA.162-201ENST00000363683 102 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms