Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SNORD56.1-201ENST00000362913 68 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 SNORD56.3-201ENST00000363507 71 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 RNA5SP267-201ENST00000364893 126 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 RNU6-95P-201ENST00000384697 107 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 RNU2-41P-201ENST00000410991 178 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.99□□□□□ -1.93
NPAS1Q99742 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.99□□□□□ -1.93
NPAS1Q99742 PTGES3P4-201ENST00000426243 356 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AL513043.1-201ENST00000439124 535 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.99□□□□□ -1.93
NPAS1Q99742 PCMTD1P1-201ENST00000455560 355 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 Y_RNA.635-201ENST00000459041 101 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 RPL9P9-202ENST00000466501 579 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.99□□□□□ -1.93
NPAS1Q99742 RPS26P21-201ENST00000475397 348 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AC021205.2-201ENST00000480069 347 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 GZMAP1-201ENST00000503054 631 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 MTND5P5-201ENST00000503764 376 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 RAC1P5-201ENST00000512182 576 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AC245166.1-201ENST00000521012 253 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.99□□□□□ -1.93
NPAS1Q99742 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.99□□□□□ -1.93
NPAS1Q99742 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.99□□□□□ -1.93
NPAS1Q99742 AC006557.5-201ENST00000603126 811 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AL132765.2-201ENST00000610812 351 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AC009233.1-201ENST00000616477 371 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 UCA1.1-201ENST00000620952 75 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AC097372.5-201ENST00000623665 376 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 U4.7-201ENST00000638126 106 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AC010733.2-201ENST00000589496 5702 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 AC093010.3-201ENST00000570269 15214 ntBASIC2.99□□□□□ -1.93
NPAS1Q99742 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPAS1Q99742 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPAS1Q99742 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NPAS1Q99742 RNU4-73P-201ENST00000363164 141 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 Y_RNA.151-201ENST00000363566 112 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 RNU6-750P-201ENST00000390946 107 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AL357075.1-201ENST00000404107 726 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 MIR548K-201ENST00000408406 116 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 RNA5SP229-201ENST00000410809 99 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.98□□□□□ -1.93
NPAS1Q99742 AL645568.3-201ENST00000433683 316 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.98□□□□□ -1.93
NPAS1Q99742 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.98□□□□□ -1.93
NPAS1Q99742 HMGN1P18-201ENST00000457642 277 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 SMURF2P1-201ENST00000514992 481 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 Y_RNA.691-201ENST00000516611 103 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NPAS1Q99742 AL355375.2-201ENST00000574825 175 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AC009163.5-201ENST00000575421 637 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.98□□□□□ -1.93
NPAS1Q99742 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.98□□□□□ -1.93
NPAS1Q99742 SRGNP1-201ENST00000603392 451 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AC009314.1-201ENST00000603871 304 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AC113139.1-201ENST00000605049 239 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AC004832.5-201ENST00000608677 401 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 AC084757.4-201ENST00000616350 526 ntBASIC2.98□□□□□ -1.93
NPAS1Q99742 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.98□□□□□ -1.93
NPAS1Q99742 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.98□□□□□ -1.93
NPAS1Q99742 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS1Q99742 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.97□□□□□ -1.93
NPAS1Q99742 SNORD62.1-201ENST00000362541 86 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 Y_RNA.135-201ENST00000363439 95 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 RNU6-306P-201ENST00000384617 107 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NPAS1Q99742 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AC096649.2-201ENST00000416186 393 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 Z82205.1-201ENST00000428456 297 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS1Q99742 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS1Q99742 MTND1P17-201ENST00000448961 204 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 BX510359.1-201ENST00000456973 237 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 RNU7-187P-201ENST00000458985 68 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 U8.21-201ENST00000459536 136 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
NPAS1Q99742 RNU6-559P-201ENST00000516151 98 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 SNORD19.2-201ENST00000516978 73 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS1Q99742 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.97□□□□□ -1.93
NPAS1Q99742 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.97□□□□□ -1.93
NPAS1Q99742 MIR4795-201ENST00000584182 89 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.97□□□□□ -1.93
NPAS1Q99742 AC016727.1-205ENST00000605437 569 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.97□□□□□ -1.93
NPAS1Q99742 MIR7112-201ENST00000616126 65 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AL359697.1-201ENST00000624879 587 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 AC110079.1-202ENST00000635213 138 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 MIR3529-201ENST00000637713 78 ntBASIC2.97□□□□□ -1.93
NPAS1Q99742 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.97□□□□□ -1.93
NPAS1Q99742 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.96□□□□□ -1.93
NPAS1Q99742 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.96□□□□□ -1.94
NPAS1Q99742 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NPAS1Q99742 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
NPAS1Q99742 Y_RNA.67-201ENST00000362870 100 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RNU6-942P-201ENST00000363002 107 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RNU6-601P-201ENST00000384540 107 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 MIR521-1-201ENST00000384902 87 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RPL21P3-201ENST00000395517 478 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 AL360182.1-201ENST00000397433 468 ntBASIC2.96□□□□□ -1.94
NPAS1Q99742 RNA5SP44-201ENST00000410446 133 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms