Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNORA70C-201ENST00000384538 135 ntBASIC5.06□□□□□ -1.6
PHOX2BQ99453 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.06□□□□□ -1.6
PHOX2BQ99453 RNU5F-2P-201ENST00000516066 82 ntBASIC5.06□□□□□ -1.6
PHOX2BQ99453 SNORA70.12-201ENST00000516084 153 ntBASIC5.06□□□□□ -1.6
PHOX2BQ99453 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PHOX2BQ99453 AC005255.1-201ENST00000593748 216 ntBASIC5.06□□□□□ -1.6
PHOX2BQ99453 AC011603.4-201ENST00000611325 277 ntBASIC5.06□□□□□ -1.6
PHOX2BQ99453 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.06□□□□□ -1.6
PHOX2BQ99453 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.06□□□□□ -1.6
PHOX2BQ99453 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PHOX2BQ99453 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 AC112198.2-201ENST00000426589 6996 ntBASIC5.06□□□□□ -1.6
PHOX2BQ99453 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PHOX2BQ99453 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHOX2BQ99453 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
PHOX2BQ99453 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHOX2BQ99453 AC104623.2-202ENST00000623477 4002 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PHOX2BQ99453 AC006206.1-201ENST00000544842 3387 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.05□□□□□ -1.6
PHOX2BQ99453 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PHOX2BQ99453 Y_RNA.24-201ENST00000362508 103 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 SNORA31-201ENST00000362607 130 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 Y_RNA.243-201ENST00000364481 109 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 Y_RNA.542-201ENST00000384641 111 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 AC006461.1-201ENST00000412637 326 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 RPS12P10-201ENST00000427031 377 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 AL161651.1-201ENST00000440882 223 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 AL121914.1-201ENST00000450188 156 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 SNORA59A-201ENST00000459326 152 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 RNU6-1007P-201ENST00000516586 107 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 SNORD19.2-201ENST00000516978 73 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 RNU1-45P-201ENST00000517191 141 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 AC090877.1-201ENST00000561418 344 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 LARP7P3-201ENST00000579888 337 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 AC005562.2-201ENST00000618264 111 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 AC073308.1-201ENST00000623696 305 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.05□□□□□ -1.6
PHOX2BQ99453 OR51H2P-202ENST00000641424 3046 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.05□□□□□ -1.6
PHOX2BQ99453 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHOX2BQ99453 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PHOX2BQ99453 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHOX2BQ99453 AP001642.1-201ENST00000624727 2117 ntBASIC5.05□□□□□ -1.6
PHOX2BQ99453 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PHOX2BQ99453 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHOX2BQ99453 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 RNU1-94P-201ENST00000362627 173 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 RNU6-1205P-201ENST00000363625 106 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 RNA5SP90-201ENST00000364801 99 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 Y_RNA.563-201ENST00000384707 108 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 MIR549A-201ENST00000385268 96 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 RNU6-1228P-201ENST00000391014 107 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 NDUFB4P8-201ENST00000435351 367 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 RPS29P10-201ENST00000439197 166 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 PHBP16-201ENST00000446318 950 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 SNORA31.9-201ENST00000516429 84 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 MIR2116-201ENST00000517221 80 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 HIGD1AP1-201ENST00000550979 275 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 EIF4A1P12-201ENST00000551910 141 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 PCGEM1.1-201ENST00000613431 131 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 AP001340.1-201ENST00000624405 217 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHOX2BQ99453 AC083843.2-201ENST00000568248 6253 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 SALL4P2-201ENST00000423288 2910 ntBASIC5.04□□□□□ -1.6
PHOX2BQ99453 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.04□□□□□ -1.6
PHOX2BQ99453 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHOX2BQ99453 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PHOX2BQ99453 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PHOX2BQ99453 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PHOX2BQ99453 AC092681.1-201ENST00000297369 291 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 SNORD113.2-201ENST00000364166 89 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 Y_RNA.341-201ENST00000365341 102 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 RNA5SP167-201ENST00000365461 116 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 RNU6-643P-201ENST00000384018 107 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 RNU6-748P-201ENST00000384648 107 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 SNORA20-201ENST00000384662 132 ntBASIC5.03□□□□□ -1.6
PHOX2BQ99453 RNA5SP372-201ENST00000390836 115 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms