Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU6-19P-201ENST00000384718 107 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNU6-606P-201ENST00000384721 111 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 U3.37-201ENST00000408528 213 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNU6-1025P-201ENST00000410629 104 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 MTCO2P19-201ENST00000427513 598 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 SUMO1P4-201ENST00000429430 302 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC010153.1-201ENST00000432862 727 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 MTCO1P19-201ENST00000443487 500 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AL139109.1-201ENST00000455491 297 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC107626.1-201ENST00000471084 183 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN2AQ99250 FAM92A1P2-202ENST00000504766 877 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNA5SP82-201ENST00000516707 92 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN2AQ99250 AC109329.1-201ENST00000518744 317 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN2AQ99250 RANP3-201ENST00000530970 276 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN2AQ99250 AL356432.3-201ENST00000568952 465 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC012213.3-201ENST00000577199 777 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 MIR4446-201ENST00000578505 67 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC005498.1-201ENST00000592125 465 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC008121.1-201ENST00000603244 268 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC012507.3-201ENST00000603556 477 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AL161798.1-201ENST00000604630 131 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN2AQ99250 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
SCN2AQ99250 RNA5SP393-201ENST00000363423 117 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 SNORA4.3-201ENST00000365564 137 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNU2-9P-201ENST00000410194 145 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN2AQ99250 RPL7P37-201ENST00000425095 738 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 MTATP6P16-201ENST00000434543 526 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN2AQ99250 RPL23AP7-203ENST00000449021 469 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN2AQ99250 RN7SKP210-201ENST00000459176 261 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC105252.1-201ENST00000503089 286 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC108078.2-201ENST00000510750 236 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNU6-928P-201ENST00000516876 104 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNU6-685P-201ENST00000517088 95 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN2AQ99250 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCN2AQ99250 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN2AQ99250 OR5AL2P-201ENST00000532185 920 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC021739.1-201ENST00000559631 174 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 MIR5692A1-201ENST00000580523 69 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 BNIP3P30-201ENST00000601184 574 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AL121917.1-203ENST00000605534 577 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 AC080013.6-201ENST00000606185 215 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN2AQ99250 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN2AQ99250 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN2AQ99250 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SCN2AQ99250 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SCN2AQ99250 MTND5P17-201ENST00000418405 1603 ntBASIC1.9□□□□□ -2.1
SCN2AQ99250 AL031779.1-201ENST00000415663 330 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN2AQ99250 MORF4L1P6-201ENST00000418771 268 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.9□□□□□ -2.11
SCN2AQ99250 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.9□□□□□ -2.11
SCN2AQ99250 MTND3P21-201ENST00000433774 331 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 RPS15AP9-201ENST00000439856 381 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN2AQ99250 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN2AQ99250 AC022493.1-201ENST00000492984 337 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.9□□□□□ -2.11
SCN2AQ99250 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN2AQ99250 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN2AQ99250 RNU6-914P-201ENST00000516749 109 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 RNU6-1220P-201ENST00000517126 108 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 SCARNA11.3-201ENST00000517276 130 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.9□□□□□ -2.11
SCN2AQ99250 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.9□□□□□ -2.11
SCN2AQ99250 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.9□□□□□ -2.11
SCN2AQ99250 DEFB131E-202ENST00000602581 683 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC078795.2-201ENST00000602835 1252 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC091805.2-201ENST00000603848 235 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC136475.10-201ENST00000620253 385 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC073534.2-201ENST00000620377 381 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN2AQ99250 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SCN2AQ99250 RNU6-1280P-201ENST00000365211 107 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 RNU4-48P-201ENST00000365559 182 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 Z98749.2-208ENST00000381646 500 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 MTCO3P30-201ENST00000426425 670 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 ISCA1P6-201ENST00000427740 390 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC093106.2-201ENST00000428212 385 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.9□□□□□ -2.11
SCN2AQ99250 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 MRPS17P3-201ENST00000465453 385 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AP000852.1-201ENST00000472460 573 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN2AQ99250 HMGB1P30-201ENST00000492455 606 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 RNU6-314P-201ENST00000516574 104 ntBASIC1.9□□□□□ -2.11
SCN2AQ99250 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms