Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL139156.1-201ENST00000412785 841 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 EIF4EP2-201ENST00000422816 654 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 HMGN2P31-201ENST00000432430 273 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU7-170P-201ENST00000459303 61 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 MED28P2-201ENST00000475771 317 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 BTF3L4P4-201ENST00000506381 449 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-677P-201ENST00000516914 101 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU7-4P-201ENST00000516961 62 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 IGKV2-23-201ENST00000518729 323 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AC034114.1-201ENST00000520293 285 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AC008489.1-201ENST00000524271 483 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 KLKP1-201ENST00000595979 403 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RPS29P30-201ENST00000600975 111 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AC012669.1-201ENST00000603209 283 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AC019176.2-201ENST00000611579 315 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AL450472.3-201ENST00000615578 367 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AL031601.2-202ENST00000622650 282 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AL049781.1-201ENST00000623195 3585 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 NCAPGP1-201ENST00000505112 1814 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 DDX10P1-201ENST00000448545 1933 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 MFSD8-233ENST00000641482 4860 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AL365440.1-201ENST00000436135 2167 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.183-201ENST00000363882 113 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 RNA5SP240-201ENST00000365355 128 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-662P-201ENST00000384253 104 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-611P-201ENST00000384276 104 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 PTMAP5-201ENST00000393073 333 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU2-20P-201ENST00000410425 191 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 CYCSP33-201ENST00000414485 327 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC006989.1-201ENST00000427212 131 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AL358232.1-201ENST00000448030 501 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC010469.2-201ENST00000496412 480 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.700-201ENST00000516806 100 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.703-201ENST00000516846 111 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 SCARNA24.2-201ENST00000516968 130 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC136932.1-201ENST00000574771 208 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC005951.2-201ENST00000576282 495 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AL355877.2-201ENST00000603670 358 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC006077.1-201ENST00000604746 343 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 AC132825.6-201ENST00000638861 357 ntBASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CDK5RAP1Q96SZ6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 Y_RNA.200-201ENST00000364018 102 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 RNY1-201ENST00000364228 113 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-1317P-201ENST00000364582 104 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-596P-201ENST00000365395 98 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 MIR628-201ENST00000385229 95 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 RNA5SP171-201ENST00000391071 115 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 MIR1298-201ENST00000408783 112 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AL159987.2-201ENST00000432754 307 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AC092573.2-201ENST00000434546 243 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 RN7SL93P-201ENST00000463035 293 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 RPL7P49-201ENST00000471402 708 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 ACA59.1-201ENST00000515966 143 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AC087441.2-201ENST00000529141 262 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AC074050.1-201ENST00000563247 211 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 CPDP1-201ENST00000579660 283 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AL713866.2-201ENST00000603579 219 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AL591516.1-201ENST00000611326 274 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AC244205.2-202ENST00000635781 342 ntBASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CDK5RAP1Q96SZ6 AL137003.2-201ENST00000606924 2538 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms