Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.66□□□□□ -2.3
IFT140Q96RY7 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 RPL26P27-201ENST00000414397 437 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 FAM204CP-201ENST00000424489 642 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 NANOGP2-201ENST00000435391 727 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 AL160314.1-201ENST00000490836 438 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 NRON-201ENST00000517270 370 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 AL357094.1-201ENST00000603845 844 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 AL139344.1-201ENST00000605228 195 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 NDUFA8P1-201ENST00000605525 367 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 AL603758.1-201ENST00000618654 241 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.65□□□□□ -2.31
IFT140Q96RY7 MIR4275-201ENST00000636486 87 ntBASIC0.65□□□□□ -2.31
IFT140Q96RY7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
IFT140Q96RY7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.64□□□□□ -2.31
IFT140Q96RY7 MIR1262-201ENST00000408276 93 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 AC009518.2-201ENST00000418056 731 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 USP9YP26-201ENST00000421008 661 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 AC019178.2-201ENST00000423595 505 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 USP9YP18-201ENST00000425912 695 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 USP9YP17-201ENST00000444617 696 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 AL929288.2-201ENST00000446368 407 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.64□□□□□ -2.31
IFT140Q96RY7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.64□□□□□ -2.31
IFT140Q96RY7 RNA5SP404-201ENST00000517118 132 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 RNA5SP290-201ENST00000517133 127 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.64□□□□□ -2.31
IFT140Q96RY7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.64□□□□□ -2.31
IFT140Q96RY7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.64□□□□□ -2.31
IFT140Q96RY7 AC022387.2-201ENST00000604050 448 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 AL078604.3-201ENST00000615580 211 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.64□□□□□ -2.31
IFT140Q96RY7 AL138713.1-201ENST00000624026 2130 ntBASIC0.64□□□□□ -2.31
IFT140Q96RY7 MIR329-2-201ENST00000385029 84 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 AC127391.1-201ENST00000411737 98 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.63□□□□□ -2.31
IFT140Q96RY7 MTCO1P44-201ENST00000441935 243 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 MTND5P8-201ENST00000449817 1083 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.63□□□□□ -2.31
IFT140Q96RY7 AC079598.5-201ENST00000547460 117 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.63□□□□□ -2.31
IFT140Q96RY7 AC095057.3-201ENST00000567102 1157 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 AC021171.1-201ENST00000603137 706 ntBASIC0.63□□□□□ -2.31
IFT140Q96RY7 RNU1-58P-201ENST00000362413 163 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 SNORD1A-201ENST00000364968 72 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
IFT140Q96RY7 RPL22P22-201ENST00000395439 379 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 MIR1912-201ENST00000410389 80 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
IFT140Q96RY7 AL353621.1-201ENST00000418219 243 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 NCOR1P3-201ENST00000420479 303 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 PIGFP2-201ENST00000421400 651 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 RPS27P16-201ENST00000425758 201 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 MEMO1P3-201ENST00000459811 302 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 RNU4-57P-201ENST00000515980 135 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 MTCO2P15-201ENST00000532655 656 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.62□□□□□ -2.31
IFT140Q96RY7 LARP7P2-201ENST00000575306 125 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 MIR8063-201ENST00000621930 81 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 AC079416.3-201ENST00000624479 549 ntBASIC0.62□□□□□ -2.31
IFT140Q96RY7 RNU5E-8P-201ENST00000363502 116 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 UBE2V1P11-201ENST00000411559 285 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC093422.3-201ENST00000428506 305 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC092170.1-201ENST00000440211 356 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AL035666.1-201ENST00000446195 348 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.61□□□□□ -2.31
IFT140Q96RY7 CENPUP1-201ENST00000526649 1202 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 RAB11AP2-201ENST00000545905 639 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC004853.1-201ENST00000604902 698 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.61□□□□□ -2.31
IFT140Q96RY7 AL590396.4-201ENST00000636779 956 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 RNU6-252P-201ENST00000363232 107 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 SNORD14D-201ENST00000384390 87 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 SNORA48.1-201ENST00000390879 135 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 CCNG1P1-201ENST00000406783 885 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC069282.1-201ENST00000411911 526 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
IFT140Q96RY7 RPS15AP9-201ENST00000439856 381 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.61□□□□□ -2.31
IFT140Q96RY7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.61□□□□□ -2.31
IFT140Q96RY7 RPL21P47-201ENST00000483696 477 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC011005.2-201ENST00000487324 359 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 SNORA31.17-201ENST00000516953 127 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 AC012414.6-201ENST00000568241 401 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 BNIP3P27-201ENST00000599991 412 ntBASIC0.61□□□□□ -2.31
IFT140Q96RY7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
IFT140Q96RY7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.6□□□□□ -2.31
IFT140Q96RY7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC092125.1-201ENST00000562568 1995 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 ZNF849P-201ENST00000594711 1566 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 MIR1267-201ENST00000408723 78 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.6□□□□□ -2.31
IFT140Q96RY7 AL050341.1-201ENST00000447743 313 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms