Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 USP9YP17-201ENST00000444617 696 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 MIR3165-201ENST00000579874 75 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AP003072.4-201ENST00000624580 310 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AL034374.1-201ENST00000406329 351 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AC245047.7-201ENST00000440265 293 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AC121334.2-201ENST00000605387 271 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AC004852.3-201ENST00000614131 326 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AC006963.1-201ENST00000624003 1052 ntBASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.12□□□□□ -2.43
CSMD1Q96PZ7 RNU6-271P-201ENST00000363858 105 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 RNU4-7P-201ENST00000364758 141 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 SNORD126-201ENST00000459475 77 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 MTATP6P9-201ENST00000515039 680 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AC068790.6-201ENST00000602558 258 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AC027119.1-201ENST00000440877 241 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 RPL18AP17-201ENST00000455326 198 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 RPL30P7-201ENST00000479312 323 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 RNU6-287P-201ENST00000516230 98 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AC104465.1-201ENST00000611365 139 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 AC106858.1-201ENST00000637497 429 ntBASIC-0.13□□□□□ -2.43
CSMD1Q96PZ7 RNU6-945P-201ENST00000383947 107 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 RNU6V-201ENST00000384105 107 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AL109913.1-201ENST00000421173 514 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AL353777.1-201ENST00000425552 326 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AL353691.1-201ENST00000451332 387 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AL049874.1-201ENST00000489560 388 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 RNU6-197P-201ENST00000516680 100 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC087897.1-201ENST00000550134 156 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AL079343.1-201ENST00000572358 1771 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC110792.3-201ENST00000595906 1614 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 OR5T3-201ENST00000303059 1023 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC010409.1-201ENST00000487382 476 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC004923.2-201ENST00000529649 369 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AL121992.2-201ENST00000606262 256 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC005832.2-201ENST00000538921 1430 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 SNORD114-9-201ENST00000364370 72 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 MTCO2P12-201ENST00000427426 682 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 SNORA40.12-201ENST00000516329 111 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 Z98751.3-201ENST00000604447 521 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 uc_338.36-201ENST00000622331 158 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 MIR7157-201ENST00000635801 60 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 MTND5P30-201ENST00000452896 1731 ntBASIC-0.14□□□□□ -2.43
CSMD1Q96PZ7 SNORD33-201ENST00000362761 85 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 RNA5SP128-201ENST00000365305 116 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 MIR605-201ENST00000385078 83 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 SNORD89-201ENST00000390981 114 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 AC110792.4-201ENST00000609843 298 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 USP9YP21-201ENST00000420603 432 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 AC090330.1-201ENST00000588646 764 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 RNU6-657P-201ENST00000383904 107 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 RNA5SP461-201ENST00000516451 104 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 AP003034.1-201ENST00000534621 422 ntBASIC-0.15□□□□□ -2.43
CSMD1Q96PZ7 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 RNA5SP240-201ENST00000365355 128 ntBASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 DHFRP6-201ENST00000401776 268 ntBASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 AC093534.1-201ENST00000504977 132 ntBASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 AC092106.3-201ENST00000611308 722 ntBASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 AP000943.4-201ENST00000622912 357 ntBASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.16□□□□□ -2.43
CSMD1Q96PZ7 AL135790.2-201ENST00000437701 267 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 HMGB1P22-201ENST00000505315 124 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 SNORA68.3-201ENST00000515906 83 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 RNA5SP255-201ENST00000516370 107 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 AP003399.1-201ENST00000637534 361 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 MIR493-201ENST00000385254 89 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 MIR644A-201ENST00000385262 94 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 RNU6-1328P-201ENST00000410938 106 ntBASIC-0.16□□□□□ -2.44
CSMD1Q96PZ7 MICF-203ENST00000432679 129 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms