Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC004223.4-201ENST00000612426 332 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AC009878.1-201ENST00000621819 340 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AL356292.1-201ENST00000283110 373 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 RNU6-1010P-201ENST00000362757 107 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 RNU5E-5P-201ENST00000365379 116 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 SNORA24.1-201ENST00000384401 135 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 MIR578-201ENST00000384828 96 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 MIR561-201ENST00000385216 97 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 HMGN2P39-201ENST00000398005 273 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 MRPL42P2-201ENST00000403169 426 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AC138623.1-201ENST00000418060 216 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AL356583.2-201ENST00000426536 280 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 RPS24P1-201ENST00000438550 371 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AL353689.1-201ENST00000438895 199 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 USP9YP15-201ENST00000442391 422 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 NDUFB1P2-201ENST00000449477 176 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 PMCHL2-203ENST00000457791 237 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AP004607.1-201ENST00000524456 203 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AC110588.1-201ENST00000559699 137 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AC093249.1-201ENST00000567049 203 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 MIR548AC-201ENST00000585049 88 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AC112191.3-201ENST00000604371 277 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 AL451064.1-201ENST00000607718 471 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 MIR3529-201ENST00000637713 78 ntBASIC1.95□□□□□ -2.1
RPRD1AQ96P16 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPRD1AQ96P16 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPRD1AQ96P16 Y_RNA.22-201ENST00000362492 102 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 RNU5F-7P-201ENST00000363696 115 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 SNORA72.3-201ENST00000365074 132 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 MIR558-201ENST00000384920 94 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 MIR186-201ENST00000384988 86 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 UBE2V1P10-201ENST00000414685 269 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.94□□□□□ -2.1
RPRD1AQ96P16 ELOCP4-201ENST00000420090 333 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.94□□□□□ -2.1
RPRD1AQ96P16 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.94□□□□□ -2.1
RPRD1AQ96P16 USP9YP12-201ENST00000450481 570 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.94□□□□□ -2.1
RPRD1AQ96P16 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 RPL21P99-201ENST00000480369 423 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AC091965.2-201ENST00000512324 613 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 SNORA3.4-201ENST00000515969 96 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 RNA5SP182-201ENST00000516064 82 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AC034114.1-201ENST00000520293 285 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 OR11H5P-201ENST00000554039 926 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AL031274.2-201ENST00000599419 203 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AL139286.2-201ENST00000606838 396 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AC098614.4-201ENST00000607601 462 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AC005296.1-201ENST00000616145 209 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 AC008121.3-201ENST00000618726 433 ntBASIC1.94□□□□□ -2.1
RPRD1AQ96P16 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.94□□□□□ -2.1
RPRD1AQ96P16 RNU6-384P-201ENST00000364900 104 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 RNU6-622P-201ENST00000384272 103 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 RNU6-1179P-201ENST00000384667 107 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 U8.13-201ENST00000390842 128 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 SNORA40.18-201ENST00000391200 128 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 MED13P1-201ENST00000428342 171 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 DNAJC19P4-201ENST00000440115 345 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AP001025.1-201ENST00000486139 332 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 RBBP4P6-201ENST00000508098 202 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AC116337.1-201ENST00000509680 687 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 RNU2-53P-201ENST00000516257 147 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 Y_RNA.687-201ENST00000516558 91 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 RNU6-1220P-201ENST00000517126 108 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AC022878.1-201ENST00000530684 149 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 IMMP1LP2-201ENST00000552954 492 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 AL157786.1-207ENST00000627771 695 ntBASIC1.93□□□□□ -2.1
RPRD1AQ96P16 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RPRD1AQ96P16 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RPRD1AQ96P16 HAUS6P2-201ENST00000433254 2404 ntBASIC1.92□□□□□ -2.1
RPRD1AQ96P16 U3.13-201ENST00000364804 214 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms