Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 TEX21P-201ENST00000447107 1476 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 Z82209.1-201ENST00000422141 2135 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC7Q96M83 Y_RNA.118-201ENST00000363300 101 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 Y_RNA.169-201ENST00000363745 96 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 RNU6-898P-201ENST00000365627 104 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 RPL23AP32-201ENST00000395315 459 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC7Q96M83 AL109913.1-201ENST00000421173 514 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 FABP5P14-201ENST00000437273 393 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC7Q96M83 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC7Q96M83 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC7Q96M83 RNU7-26P-201ENST00000458980 63 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC7Q96M83 AC145350.1-201ENST00000567426 208 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC7Q96M83 MIR1273C-201ENST00000578669 77 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 AC008121.1-201ENST00000603244 268 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.29□□□□□ -2.04
CCDC7Q96M83 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC7Q96M83 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC7Q96M83 Y_RNA.33-201ENST00000362591 102 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 RNY1P12-201ENST00000364251 105 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 RNU6-220P-201ENST00000390919 107 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC114491.1-201ENST00000416095 246 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 AL451074.3-201ENST00000437709 472 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 RPS24P1-201ENST00000438550 371 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 AL078601.1-201ENST00000444542 271 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC010486.2-201ENST00000505572 483 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 SCARNA3-201ENST00000517097 143 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 NIFKP6-201ENST00000598115 845 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AL021997.1-201ENST00000605757 193 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AL512598.1-201ENST00000610158 273 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC068944.2-201ENST00000610373 403 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 uc_338.14-201ENST00000613162 166 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AL359547.2-201ENST00000615810 418 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 MIR6134-201ENST00000617606 109 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC098657.3-201ENST00000620434 263 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 AC091931.1-201ENST00000623488 728 ntBASIC2.28□□□□□ -2.04
CCDC7Q96M83 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC7Q96M83 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC7Q96M83 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
CCDC7Q96M83 MTND5P30-201ENST00000452896 1731 ntBASIC2.28□□□□□ -2.05
CCDC7Q96M83 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC7Q96M83 SNORA20.2-201ENST00000383922 131 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 RNU6-641P-201ENST00000384006 107 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 SNORA40C-201ENST00000391285 128 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 RPS3AP36-201ENST00000398190 775 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC7Q96M83 RN7SKP101-201ENST00000411376 320 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AL030996.1-201ENST00000411430 235 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC127391.1-201ENST00000411737 98 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC7Q96M83 RPL7P34-201ENST00000433316 712 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 HMGB1P31-201ENST00000437242 427 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC7Q96M83 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC7Q96M83 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.27□□□□□ -2.05
CCDC7Q96M83 BTF3P15-201ENST00000455606 336 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 SNRPFP4-201ENST00000456366 242 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC7Q96M83 AL441985.1-201ENST00000457727 251 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AP001324.2-201ENST00000461163 319 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC023194.1-201ENST00000493084 308 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC116655.1-201ENST00000508324 901 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 RNU2-46P-201ENST00000517038 113 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC005771.1-201ENST00000585581 349 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC091304.9-201ENST00000612091 226 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AL133173.2-201ENST00000614270 90 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC008250.2-201ENST00000615261 205 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC024940.5-201ENST00000622889 474 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC025048.6-202ENST00000627667 438 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 MIR7157-201ENST00000635801 60 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AC131280.1-202ENST00000624067 4211 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 AL359854.1-201ENST00000614203 1594 ntBASIC2.27□□□□□ -2.05
CCDC7Q96M83 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC7Q96M83 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.27□□□□□ -2.05
CCDC7Q96M83 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC7Q96M83 RNY4P34-201ENST00000364779 95 ntBASIC2.26□□□□□ -2.05
CCDC7Q96M83 RNU6-395P-201ENST00000365662 106 ntBASIC2.26□□□□□ -2.05
CCDC7Q96M83 RNU1-57P-201ENST00000384491 166 ntBASIC2.26□□□□□ -2.05
CCDC7Q96M83 MIR558-201ENST00000384920 94 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms