Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNU6-91P-201ENST00000607774 107 ntBASIC4.75□□□□□ -1.65
CALR3Q96L12 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.75□□□□□ -1.65
CALR3Q96L12 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.75□□□□□ -1.65
CALR3Q96L12 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.75□□□□□ -1.65
CALR3Q96L12 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CALR3Q96L12 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CALR3Q96L12 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.75□□□□□ -1.65
CALR3Q96L12 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CALR3Q96L12 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CALR3Q96L12 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CALR3Q96L12 RNU6-102P-201ENST00000384485 104 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 AL033519.2-201ENST00000403958 392 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 AP000567.1-201ENST00000406413 156 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 MIR548I3-201ENST00000408378 149 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 MIR548I1-201ENST00000408810 149 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 RNU2-49P-201ENST00000410666 184 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.74□□□□□ -1.65
CALR3Q96L12 COX6B1P7-201ENST00000430845 235 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 AL445305.1-201ENST00000432577 575 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 HSPE1P25-201ENST00000455484 251 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 AC090525.1-201ENST00000479116 478 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 RPL26P26-201ENST00000480251 434 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 PARP4P3-201ENST00000510265 317 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 AK6P2-201ENST00000549020 471 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 CYP4A43P-201ENST00000568156 121 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 MIR3136-201ENST00000583498 78 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.74□□□□□ -1.65
CALR3Q96L12 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.74□□□□□ -1.65
CALR3Q96L12 SNORD113-5-201ENST00000607261 78 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 MIR6826-201ENST00000617808 98 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 MIR6853-201ENST00000619642 74 ntBASIC4.74□□□□□ -1.65
CALR3Q96L12 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.74□□□□□ -1.65
CALR3Q96L12 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CALR3Q96L12 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.74□□□□□ -1.65
CALR3Q96L12 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CALR3Q96L12 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CALR3Q96L12 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CALR3Q96L12 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CALR3Q96L12 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CALR3Q96L12 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CALR3Q96L12 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CALR3Q96L12 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CALR3Q96L12 RNU6-1266P-201ENST00000362794 105 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CALR3Q96L12 U3.22-201ENST00000391120 215 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.73□□□□□ -1.65
CALR3Q96L12 OR4C10P-201ENST00000434991 931 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 HLA-N-201ENST00000437516 135 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.73□□□□□ -1.65
CALR3Q96L12 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.73□□□□□ -1.65
CALR3Q96L12 AL592156.1-201ENST00000508758 304 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 SERF1AP1-201ENST00000514575 187 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 RNU4-71P-201ENST00000516258 113 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 SCARNA21.2-201ENST00000516600 166 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.73□□□□□ -1.65
CALR3Q96L12 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.73□□□□□ -1.65
CALR3Q96L12 MIR4737-201ENST00000583979 81 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CALR3Q96L12 AC006111.3-201ENST00000622137 383 ntBASIC4.73□□□□□ -1.65
CALR3Q96L12 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.73□□□□□ -1.65
CALR3Q96L12 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CALR3Q96L12 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.73□□□□□ -1.65
CALR3Q96L12 AF127577.6-201ENST00000623352 2191 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.72□□□□□ -1.65
CALR3Q96L12 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CALR3Q96L12 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.72□□□□□ -1.65
CALR3Q96L12 Y_RNA.65-201ENST00000362846 100 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 RNU4-56P-201ENST00000364700 142 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 Y_RNA.277-201ENST00000364754 102 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 RNU1-64P-201ENST00000365443 163 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CALR3Q96L12 RNU6-209P-201ENST00000384118 107 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 RNU4-70P-201ENST00000384579 139 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 RNU6-1140P-201ENST00000410517 106 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.72□□□□□ -1.65
CALR3Q96L12 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.72□□□□□ -1.65
CALR3Q96L12 AL162591.2-201ENST00000449634 317 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 ABCF2P2-201ENST00000450549 296 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.72□□□□□ -1.65
CALR3Q96L12 snoU13.20-201ENST00000459180 104 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 AC073901.1-201ENST00000462471 408 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 AIG1P1-201ENST00000503376 148 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 IFITM8P-201ENST00000522529 394 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 MIR4423-201ENST00000580922 80 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.72□□□□□ -1.65
CALR3Q96L12 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 AC068870.2-201ENST00000620635 389 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 SNORD98-201ENST00000636377 67 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 AC010889.1-201ENST00000566193 2666 ntBASIC4.72□□□□□ -1.65
CALR3Q96L12 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.72□□□□□ -1.65
CALR3Q96L12 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CALR3Q96L12 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.72□□□□□ -1.65
CALR3Q96L12 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.72□□□□□ -1.65
CALR3Q96L12 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.71□□□□□ -1.65
CALR3Q96L12 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CALR3Q96L12 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CALR3Q96L12 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.71□□□□□ -1.66
CALR3Q96L12 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CALR3Q96L12 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CALR3Q96L12 AC021146.4-201ENST00000309229 279 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms