Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC138393.1-203ENST00000327086 343 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 OR4G2P-201ENST00000328113 903 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 Y_RNA.359-201ENST00000365498 102 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 RNU6-45P-201ENST00000384471 107 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 MIR128-1-201ENST00000384921 82 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AL663109.1-201ENST00000411498 844 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 CYCSP33-201ENST00000414485 327 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 RPL21P90-201ENST00000415692 466 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC003685.2-201ENST00000422795 395 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 RPS3AP44-201ENST00000425466 790 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 RPL30P4-201ENST00000429309 333 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC073464.1-201ENST00000429823 534 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 ARL5AP4-201ENST00000430731 512 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AL118520.1-201ENST00000450770 291 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 SNORD109B-201ENST00000458961 67 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 SNORD109A-201ENST00000459128 67 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC079140.5-201ENST00000507882 310 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 RN7SKP219-201ENST00000516825 296 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC010186.2-204ENST00000537668 439 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC136619.2-201ENST00000563361 631 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AL138976.2-201ENST00000563989 694 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC105245.1-201ENST00000581934 244 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 MIR3941-201ENST00000582572 103 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 MIR3611-201ENST00000584484 83 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 Z84480.1-201ENST00000605131 311 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC067747.1-201ENST00000608026 250 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC069294.1-201ENST00000608397 350 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 RMST_7.1-201ENST00000621935 268 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AP003400.5-201ENST00000624827 617 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 AC006020.1-201ENST00000420179 1854 ntBASIC1.88□□□□□ -2.11
RPUSD4Q96CM3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 MIR208A-201ENST00000362287 71 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 RNU6-715P-201ENST00000365204 103 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 Y_RNA.399-201ENST00000383955 105 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 RNU6-622P-201ENST00000384272 103 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AL139039.1-201ENST00000401900 692 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC097463.2-201ENST00000421074 142 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC010975.2-201ENST00000427781 588 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 CALM1P1-201ENST00000442082 433 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 RPS29P15-201ENST00000458329 171 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 RPS3AP17-201ENST00000472594 777 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC092436.1-201ENST00000506450 503 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 MTND2P33-201ENST00000506452 1031 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 SLC25A15P5-201ENST00000508033 253 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC009063.1-201ENST00000563342 702 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC105137.2-201ENST00000569073 466 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 MIR5571-201ENST00000577998 113 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 MIR3199-1-201ENST00000582434 88 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC096772.1-201ENST00000609146 564 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC104073.3-201ENST00000610942 955 ntBASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPUSD4Q96CM3 SNORA38-201ENST00000363946 132 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 RNU4-24P-201ENST00000364565 139 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 RNU6-7-201ENST00000364784 107 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 RNU6-8-201ENST00000365467 107 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 RNU6-116P-201ENST00000384042 109 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 RNU6-517P-201ENST00000384362 110 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 RNU6-1127P-201ENST00000384580 107 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 MIR491-201ENST00000384877 84 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 SNORA48.2-201ENST00000390926 124 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 RNU2-16P-201ENST00000410712 136 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 Z98742.2-201ENST00000431564 187 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 AC107083.1-201ENST00000439643 279 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 GPM6BP3-201ENST00000442797 145 ntBASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.86□□□□□ -2.11
RPUSD4Q96CM3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms