Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MIR223-201ENST00000385204 110 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 RNU2-70P-201ENST00000410718 179 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 AC009238.2-201ENST00000431026 355 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.29□□□□□ -1.56
PTCD2Q8WV60 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC5.29□□□□□ -1.56
PTCD2Q8WV60 AC093270.2-201ENST00000486157 792 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 AC025647.1-201ENST00000517879 253 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 EIF4A1P12-201ENST00000551910 141 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 AL390726.5-202ENST00000564800 256 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 MIR3691-201ENST00000578066 90 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PTCD2Q8WV60 AL356489.2-201ENST00000566968 3528 ntBASIC5.29□□□□□ -1.56
PTCD2Q8WV60 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCD2Q8WV60 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PTCD2Q8WV60 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 RNU1-75P-201ENST00000347264 129 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 SNORA58B-201ENST00000364259 136 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 RNU1-106P-201ENST00000384382 164 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 SNORA67-201ENST00000384423 137 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 Y_RNA.528-201ENST00000384575 108 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 Y_RNA.544-201ENST00000384650 113 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 MIR105-1-201ENST00000385222 81 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 TOMM22P1-201ENST00000418578 312 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 MTATP6P21-201ENST00000440681 189 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 RN7SL132P-201ENST00000478131 296 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 RPL30P5-201ENST00000494923 336 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 RNU6-1146P-201ENST00000516282 102 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 SNORA18.4-201ENST00000516440 124 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 RNU7-116P-201ENST00000516940 62 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 ACA59.2-201ENST00000517061 156 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 AC233702.9-201ENST00000581528 203 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 AL049861.1-201ENST00000603130 150 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 AC118658.2-201ENST00000618697 459 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 AC007256.1-201ENST00000392253 2765 ntBASIC5.28□□□□□ -1.56
PTCD2Q8WV60 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PTCD2Q8WV60 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 NOL8P1-201ENST00000508336 3529 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 TLK1P1-201ENST00000456760 2440 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 U8.4-201ENST00000363626 134 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 SNORA18.2-201ENST00000383865 132 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 RNU6-1323P-201ENST00000384025 107 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 RN7SKP12-201ENST00000516275 143 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 RNA5SP281-201ENST00000516504 135 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 RNU2-44P-201ENST00000516795 194 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 AC006133.1-201ENST00000617106 264 ntBASIC5.27□□□□□ -1.57
PTCD2Q8WV60 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD2Q8WV60 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 Y_RNA.220-201ENST00000364244 109 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 RNU6-820P-201ENST00000384273 107 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 MIR105-2-201ENST00000385083 81 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 RNU6-440P-201ENST00000390882 105 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AC007738.1-201ENST00000413892 348 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 CYCSP48-201ENST00000417124 323 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AL356535.1-201ENST00000440335 398 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 RPS27AP10-201ENST00000496103 208 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 RN7SKP43-201ENST00000516173 320 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AC044860.2-201ENST00000561005 179 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AL442128.1-201ENST00000615151 90 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AL138880.2-201ENST00000616214 239 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 MIR6730-201ENST00000622213 67 ntBASIC5.26□□□□□ -1.57
PTCD2Q8WV60 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PTCD2Q8WV60 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD2Q8WV60 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD2Q8WV60 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
PTCD2Q8WV60 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms