Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 VN1R82P-201ENST00000601481 356 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AP001981.2-201ENST00000603241 418 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC112220.2-201ENST00000605513 533 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AP001596.2-201ENST00000608410 312 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AL357080.1-201ENST00000617394 239 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC123767.1-202ENST00000620407 817 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AL589994.2-201ENST00000621124 579 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 Y_RNA.40-201ENST00000362645 93 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-1210P-201ENST00000363775 107 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-353P-201ENST00000364266 108 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-843P-201ENST00000384454 104 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-110P-201ENST00000384508 104 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AC138623.1-201ENST00000418060 216 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 VN1R42P-201ENST00000424651 344 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AC004941.2-201ENST00000427009 228 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 ELOCP3-201ENST00000439303 348 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 MTCO2P25-201ENST00000447065 681 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 BTF3P15-201ENST00000455606 336 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 SNRPFP4-201ENST00000456366 242 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNA5SP269-201ENST00000459032 137 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 UBE2DNL-203ENST00000474922 222 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 MED28P2-201ENST00000475771 317 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNU4-54P-201ENST00000516428 129 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RN7SKP49-201ENST00000516675 260 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNA5SP481-201ENST00000516814 122 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-1261P-201ENST00000517194 104 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AC090142.3-201ENST00000519012 385 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 RPS3AP4-201ENST00000555161 764 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 MIR6835-201ENST00000621552 64 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AL445264.1-201ENST00000621719 171 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 AC068647.2-201ENST00000637380 353 ntBASIC0.31□□□□□ -2.36
SPTSSBQ8NFR3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 RNA5SP361-201ENST00000362686 118 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-216P-201ENST00000363282 104 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-114P-201ENST00000384704 105 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 MIR200A-201ENST00000384875 90 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 MIR222-201ENST00000384992 110 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 SNORD12-201ENST00000391002 90 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 UBE2V1P2-201ENST00000397758 440 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AL356776.1-201ENST00000406574 447 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AL591043.1-201ENST00000432461 424 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 MTND1P30-201ENST00000441241 901 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC007000.2-201ENST00000442564 487 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 MTND1P16-201ENST00000465177 898 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 TRBV12-1-201ENST00000479785 344 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC104629.1-201ENST00000494226 508 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC114981.1-201ENST00000503897 678 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 MTND4P2-201ENST00000507767 1203 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC097473.1-201ENST00000508142 408 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 RNA5SP121-201ENST00000516537 101 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 SNORA31.16-201ENST00000516773 139 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 RN7SKP219-201ENST00000516825 296 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AP003484.1-201ENST00000530974 250 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC137800.2-201ENST00000574375 120 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 DPPA3P3-201ENST00000603842 430 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 AC120349.3-201ENST00000624377 529 ntBASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.3□□□□□ -2.36
SPTSSBQ8NFR3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-288P-201ENST00000363690 104 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 SNORA63D-201ENST00000364359 132 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 Y_RNA.332-201ENST00000365271 113 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 Y_RNA.333-201ENST00000365274 102 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-549P-201ENST00000384433 107 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 RPS3AP1-201ENST00000413190 320 ntBASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.29□□□□□ -2.36
SPTSSBQ8NFR3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms