Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC098831.1-201ENST00000440661 216 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 SLC2A13P1-201ENST00000531560 322 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 BNIP3P25-201ENST00000596023 559 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC012669.1-201ENST00000603209 283 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AL596245.1-201ENST00000618994 362 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RNU6-43P-201ENST00000384302 107 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.571-201ENST00000384753 98 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RPS12P24-201ENST00000412619 387 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC117503.1-201ENST00000472241 394 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC087343.1-201ENST00000477341 475 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 HMGB1P28-201ENST00000507778 552 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RNU6-885P-201ENST00000516607 104 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RN7SKP258-201ENST00000517151 304 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 NIFKP6-201ENST00000598115 845 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC026741.1-201ENST00000605892 482 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC092953.2-201ENST00000608000 699 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC078880.5-201ENST00000617845 421 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC130454.1-201ENST00000622948 401 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC093875.1-201ENST00000623688 504 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RNU6-1141P-201ENST00000364520 107 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RNU6-418P-201ENST00000384035 107 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RNU6-432P-201ENST00000384196 109 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC244505.3-201ENST00000454598 187 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC136619.2-201ENST00000563361 631 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC009237.15-201ENST00000610252 501 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AL163152.1-201ENST00000642001 374 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 MTND1P16-201ENST00000465177 898 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RPL7P43-201ENST00000478876 753 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC018868.1-201ENST00000491307 315 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 OR5B19P-201ENST00000531766 928 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 MIR1273C-201ENST00000578669 77 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 DEFB130C-202ENST00000530001 230 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 MIR4295-201ENST00000585286 85 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC004987.4-201ENST00000603383 338 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC012557.2-201ENST00000605919 418 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC098614.4-201ENST00000607601 462 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC092140.2-201ENST00000618027 521 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AP003485.1-201ENST00000625093 753 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 MIR1267-201ENST00000408723 78 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AL590556.1-201ENST00000423231 483 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 MTCO3P46-201ENST00000425787 232 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 MTND4P6-201ENST00000438297 472 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC023632.1-201ENST00000518463 375 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC022254.1-201ENST00000567857 235 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 MIR4714-201ENST00000580728 77 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC008759.3-201ENST00000613300 508 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 AC010889.1-201ENST00000566193 2666 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 FARSBP1-201ENST00000435808 1778 ntBASIC0.28□□□□□ -2.37
SYNE1Q8NF91 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.37
SYNE1Q8NF91 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MIR1912-201ENST00000410389 80 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC138623.1-201ENST00000418060 216 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 GTF2IP13-201ENST00000438487 386 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC069257.2-201ENST00000441819 155 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RPL39P28-201ENST00000465655 155 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC006512.1-201ENST00000468816 291 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC069304.2-201ENST00000605154 435 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL355802.3-201ENST00000607571 545 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC107075.1-201ENST00000613695 314 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC010975.3-201ENST00000618727 978 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC006001.4-201ENST00000622243 395 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 Z69720.2-201ENST00000624755 279 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 SNORD95.1-201ENST00000364099 68 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU5A-8P-201ENST00000364102 114 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.255-201ENST00000364581 97 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU6-701P-201ENST00000384059 107 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU2-49P-201ENST00000410666 184 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU6-1328P-201ENST00000410938 106 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNA5SP450-201ENST00000411206 102 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RAC1P6-201ENST00000423911 575 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL121601.2-201ENST00000438019 707 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms