Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 U4.1-201ENST00000620349 87 ntBASIC4.73□□□□□ -1.65
RETREG2Q8NC44 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.73□□□□□ -1.65
RETREG2Q8NC44 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 SNORD74.4-201ENST00000364129 80 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 Y_RNA.405-201ENST00000383979 100 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 Y_RNA.451-201ENST00000384200 100 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 Y_RNA.524-201ENST00000384564 100 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 Y_RNA.561-201ENST00000384694 100 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 MIR200C-201ENST00000384980 68 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 MIR767-201ENST00000390228 109 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 RNU6ATAC-201ENST00000408749 126 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 Y_RNA.618-201ENST00000410949 107 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AP000907.1-201ENST00000428428 510 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 RPL23AP46-201ENST00000438548 490 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 RPS29P7-201ENST00000439662 171 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 SNORA70.14-201ENST00000516205 110 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC006064.5-201ENST00000541782 248 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC021231.3-201ENST00000558497 370 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC008269.2-201ENST00000561915 1105 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 MIR4444-1-201ENST00000581696 74 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 MIR4444-2-201ENST00000584390 74 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC006557.5-201ENST00000603126 811 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 PRR13P7-201ENST00000605538 430 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 RPL23AP88-201ENST00000605759 454 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 MIR6075-201ENST00000620782 95 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC091903.1-201ENST00000624322 454 ntBASIC4.72□□□□□ -1.65
RETREG2Q8NC44 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.72□□□□□ -1.65
RETREG2Q8NC44 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.71□□□□□ -1.66
RETREG2Q8NC44 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.71□□□□□ -1.66
RETREG2Q8NC44 RNU4-50P-201ENST00000364361 141 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 U3.13-201ENST00000364804 214 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 MTHFD2P2-201ENST00000407725 247 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 Y_RNA.592-201ENST00000410274 109 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 DPH3P2-201ENST00000422618 250 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.71□□□□□ -1.66
RETREG2Q8NC44 RPL39P29-201ENST00000447779 157 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 AL358232.1-201ENST00000448030 501 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 MTCO3P8-201ENST00000453691 755 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 snoU13.22-201ENST00000459428 104 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 RNU7-169P-201ENST00000459456 61 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 SNORD59.2-201ENST00000516873 68 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 RNA5SP143-201ENST00000516936 115 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 AC040926.1-201ENST00000530195 238 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RETREG2Q8NC44 ZNF826P-207ENST00000622273 1910 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 AC073073.2-201ENST00000609827 2578 ntBASIC4.71□□□□□ -1.66
RETREG2Q8NC44 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RETREG2Q8NC44 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.71□□□□□ -1.66
RETREG2Q8NC44 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RETREG2Q8NC44 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 Y_RNA.193-201ENST00000363979 102 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 Y_RNA.557-201ENST00000384680 107 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AC114482.1-201ENST00000418010 247 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AL591419.1-201ENST00000427423 339 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 MTCO3P29-201ENST00000432119 779 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 GPM6BP3-201ENST00000442797 145 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AC009296.1-201ENST00000443146 155 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 SNRPGP7-201ENST00000469016 106 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 RPL23AP75-201ENST00000491601 451 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 RNU6-794P-201ENST00000517261 64 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AC110588.1-201ENST00000559699 137 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 RPS29P30-201ENST00000600975 111 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AL391813.1-201ENST00000603098 260 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AL606490.9-201ENST00000603331 271 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 MIR7702-201ENST00000621931 59 ntBASIC4.7□□□□□ -1.66
RETREG2Q8NC44 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RETREG2Q8NC44 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.69□□□□□ -1.66
RETREG2Q8NC44 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.69□□□□□ -1.66
RETREG2Q8NC44 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.69□□□□□ -1.66
RETREG2Q8NC44 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.69□□□□□ -1.66
RETREG2Q8NC44 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms