Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AP005435.4-201ENST00000529514 284 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC025678.1-201ENST00000567861 338 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 MIR4713-201ENST00000582691 75 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 SEPT7P9-203ENST00000604116 343 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC121334.2-201ENST00000605387 271 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 BX248123.2-201ENST00000606318 124 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 uc_338.5-201ENST00000611839 155 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC021755.4-201ENST00000616620 456 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AL359314.1-201ENST00000616913 261 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC006338.1-201ENST00000618453 749 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC099842.1-201ENST00000619919 596 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 U1.36-201ENST00000620684 176 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC024940.5-201ENST00000622889 474 ntBASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.35□□□□□ -2.19
ZIC4Q8N9L1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 MIR412-201ENST00000362142 91 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNU6-655P-201ENST00000362858 107 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNU6-931P-201ENST00000363850 107 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNU6-457P-201ENST00000363999 107 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNA5SP99-201ENST00000364020 114 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNU4-42P-201ENST00000364738 142 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 Y_RNA.623-201ENST00000411128 95 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AC092809.3-201ENST00000415453 231 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AL353777.1-201ENST00000425552 326 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNA5SP57-201ENST00000459463 123 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 Y_RNA.689-201ENST00000516589 107 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNU6-1003P-201ENST00000517099 105 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 RNU6-201P-201ENST00000517100 61 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AP003392.2-201ENST00000527269 208 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AC022880.1-201ENST00000534017 973 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 GNAI2P1-201ENST00000541815 315 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AC123904.2-201ENST00000548059 300 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AC108747.1-201ENST00000609508 535 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AL157392.4-201ENST00000609756 345 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AL353997.5-201ENST00000618886 171 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AP002371.2-201ENST00000624450 503 ntBASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.34□□□□□ -2.19
ZIC4Q8N9L1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
ZIC4Q8N9L1 MTND4P16-201ENST00000466108 1367 ntBASIC1.34□□□□□ -2.2
ZIC4Q8N9L1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 SNORD14D-201ENST00000384390 87 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 RNU6-1274P-201ENST00000384557 107 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 MIR1283-2-201ENST00000408621 87 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 VN1R36P-201ENST00000414936 291 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AL627311.1-201ENST00000431514 115 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 RPL23AP30-201ENST00000432419 501 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC084290.1-201ENST00000434995 374 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AL008629.1-201ENST00000438615 184 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 MTATP6P14-201ENST00000455189 673 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC006026.2-201ENST00000457376 180 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 USP9YP25-201ENST00000457708 443 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC096745.1-201ENST00000509945 370 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC112206.4-201ENST00000515142 405 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC135279.1-201ENST00000543493 504 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 CR383656.8-201ENST00000549046 145 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 HSBP1P1-201ENST00000555205 166 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AL022154.1-201ENST00000604698 785 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AL391813.2-201ENST00000609113 322 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AL355816.2-201ENST00000610049 647 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 AL359757.2-201ENST00000624309 274 ntBASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ZIC4Q8N9L1 FARSBP1-201ENST00000435808 1778 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RNU6-1210P-201ENST00000363775 107 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RNY4P16-201ENST00000364768 94 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RNU6-72P-201ENST00000384285 79 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RNU11-3P-201ENST00000391111 133 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RPS20P2-201ENST00000402520 389 ntBASIC1.32□□□□□ -2.2
ZIC4Q8N9L1 RNU2-48P-201ENST00000410694 191 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms