Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VRK3Q8IV63 UBE2L2-201ENST00000254302 429 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 RNU6-212P-201ENST00000362642 104 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 MIR301A-201ENST00000385261 86 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 Y_RNA.592-201ENST00000410274 109 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 AL592045.1-201ENST00000429867 352 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC092573.2-201ENST00000434546 243 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC004383.1-201ENST00000438135 289 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 NDUFB1P2-201ENST00000449477 176 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 RNU7-169P-201ENST00000459456 61 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC025518.1-201ENST00000479856 347 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 RNU6-397P-201ENST00000516226 104 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 MIR892C-201ENST00000516410 77 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 RNU6-182P-201ENST00000516970 105 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 RNA5SP471-201ENST00000516971 106 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 AP000787.2-201ENST00000604432 568 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 AP001282.2-201ENST00000616149 309 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC137590.2-201ENST00000619709 240 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.43□□□□□ -1.86
VRK3Q8IV63 AC116096.1-201ENST00000566804 2314 ntBASIC3.43□□□□□ -1.86
VRK3Q8IV63 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VRK3Q8IV63 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VRK3Q8IV63 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VRK3Q8IV63 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VRK3Q8IV63 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 RPL9P7-201ENST00000330965 580 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 MIR335-201ENST00000362173 94 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 Y_RNA.180-201ENST00000363867 113 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNY1-201ENST00000364228 113 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNU6-1317P-201ENST00000364582 104 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNU6-384P-201ENST00000364900 104 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 Y_RNA.539-201ENST00000384635 107 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 MIR153-1-201ENST00000384914 90 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNU6-1203P-201ENST00000410703 110 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 CKS1BP5-201ENST00000434172 273 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 AL513043.1-201ENST00000439124 535 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RPEP5-201ENST00000441137 268 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 HIGD1AP2-201ENST00000446367 280 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 AL392103.1-201ENST00000447000 198 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RPL9P9-202ENST00000466501 579 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 AC133134.1-201ENST00000466800 359 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 HSPE1P6-201ENST00000479457 291 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RPL30P10-201ENST00000488148 337 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNU2-27P-201ENST00000516185 142 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNU5B-3P-201ENST00000516601 115 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNA5SP309-201ENST00000516670 106 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 RNU6-570P-201ENST00000517051 105 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 IGKV2D-19-201ENST00000523346 262 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 AL121603.1-201ENST00000553815 142 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 AL157871.3-201ENST00000557231 293 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 MIR5047-201ENST00000579212 100 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 FTX_2.1-201ENST00000618816 94 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 AC034229.5-201ENST00000624258 185 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.42□□□□□ -1.86
VRK3Q8IV63 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VRK3Q8IV63 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK3Q8IV63 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VRK3Q8IV63 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VRK3Q8IV63 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
VRK3Q8IV63 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
VRK3Q8IV63 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VRK3Q8IV63 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VRK3Q8IV63 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.41□□□□□ -1.86
VRK3Q8IV63 RNU5A-1-201ENST00000362698 116 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 RNU6-395P-201ENST00000365662 106 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 Y_RNA.471-201ENST00000384312 102 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 RNU6-933P-201ENST00000384424 107 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 SNORA69.1-201ENST00000390904 137 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 MIR548M-201ENST00000408260 86 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 MIR548H3-201ENST00000408771 118 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 RNU2-25P-201ENST00000411041 191 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 SNORD56-201ENST00000413522 71 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 RPL21P38-201ENST00000418090 167 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 AC007098.1-201ENST00000420122 367 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 MTCO1P39-201ENST00000426148 480 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 MYL8P-204ENST00000431574 518 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 HMGN2P31-201ENST00000432430 273 ntBASIC3.41□□□□□ -1.86
VRK3Q8IV63 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
VRK3Q8IV63 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.41□□□□□ -1.86
VRK3Q8IV63 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.41□□□□□ -1.86
VRK3Q8IV63 RNU6-789P-201ENST00000517105 102 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms