Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.66□□□□□ -1.98
LDB1Q86U70 CR383656.8-201ENST00000549046 145 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.66□□□□□ -1.98
LDB1Q86U70 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.66□□□□□ -1.98
LDB1Q86U70 AL627309.6-201ENST00000606857 840 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 DISC2.1-201ENST00000612827 205 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 Z69720.2-201ENST00000624755 279 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.66□□□□□ -1.98
LDB1Q86U70 AC010329.5-201ENST00000623497 2174 ntBASIC2.66□□□□□ -1.98
LDB1Q86U70 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
LDB1Q86U70 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
LDB1Q86U70 MTND5P30-201ENST00000452896 1731 ntBASIC2.65□□□□□ -1.98
LDB1Q86U70 AC027514.1-201ENST00000588561 1603 ntBASIC2.65□□□□□ -1.98
LDB1Q86U70 RNU6-1090P-201ENST00000364065 94 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 Y_RNA.450-201ENST00000384198 113 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 RNA5SP21-201ENST00000410917 96 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 RNU6-1068P-201ENST00000410958 103 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 ARL5AP1-201ENST00000418991 388 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 C8orf59P1-201ENST00000429930 303 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 AL365400.1-201ENST00000431854 640 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.65□□□□□ -1.99
LDB1Q86U70 RPS15AP7-201ENST00000439294 405 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 RPL39P40-201ENST00000445481 146 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 UBBP3-201ENST00000445497 241 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 AC012308.1-201ENST00000451232 178 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 DYNLL1P5-201ENST00000467158 270 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 MED28P2-201ENST00000475771 317 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 RPL38P4-201ENST00000502376 214 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LDB1Q86U70 RNU5B-3P-201ENST00000516601 115 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 SNORA25.17-201ENST00000517184 124 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 BTF3P12-201ENST00000519620 469 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 RPL7P20-201ENST00000520308 745 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.65□□□□□ -1.99
LDB1Q86U70 COX6CP5-201ENST00000527162 228 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.65□□□□□ -1.99
LDB1Q86U70 OR11H5P-201ENST00000554039 926 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.65□□□□□ -1.99
LDB1Q86U70 AC103810.1-201ENST00000579873 453 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LDB1Q86U70 RNU6-91P-201ENST00000607774 107 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 MIR7106-201ENST00000612419 65 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
LDB1Q86U70 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
LDB1Q86U70 RMST_7.1-201ENST00000621935 268 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.65□□□□□ -1.99
LDB1Q86U70 AC138627.2-201ENST00000624202 601 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 MIR3529-201ENST00000637713 78 ntBASIC2.65□□□□□ -1.99
LDB1Q86U70 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.65□□□□□ -1.99
LDB1Q86U70 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LDB1Q86U70 AL109809.4-201ENST00000603520 2185 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC138393.1-203ENST00000327086 343 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 VTRNA1-1-201ENST00000363120 99 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 RNU6-266P-201ENST00000364225 107 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 FCF1P9-201ENST00000412546 282 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.64□□□□□ -1.99
LDB1Q86U70 USP9YP18-201ENST00000425912 695 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.64□□□□□ -1.99
LDB1Q86U70 AC105272.1-201ENST00000438604 198 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.64□□□□□ -1.99
LDB1Q86U70 GSTA11P-201ENST00000452866 669 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AP001324.2-201ENST00000461163 319 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 RPL21P99-201ENST00000480369 423 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC096576.1-201ENST00000489014 359 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.64□□□□□ -1.99
LDB1Q86U70 SNORA43.2-201ENST00000516652 128 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC069113.1-201ENST00000517763 267 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 CENPUP1-201ENST00000526649 1202 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 MTND1P35-201ENST00000526739 508 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
LDB1Q86U70 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.64□□□□□ -1.99
LDB1Q86U70 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.64□□□□□ -1.99
LDB1Q86U70 AC090115.3-201ENST00000553218 849 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.64□□□□□ -1.99
LDB1Q86U70 OR1M4P-201ENST00000589199 287 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC008121.1-201ENST00000603244 268 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 AC002044.1-201ENST00000606707 158 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
LDB1Q86U70 AC090517.2-201ENST00000614966 680 ntBASIC2.64□□□□□ -1.99
LDB1Q86U70 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.64□□□□□ -1.99
LDB1Q86U70 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.64□□□□□ -1.99
LDB1Q86U70 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
LDB1Q86U70 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LDB1Q86U70 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.63□□□□□ -1.99
LDB1Q86U70 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LDB1Q86U70 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.63□□□□□ -1.99
LDB1Q86U70 AL359854.1-201ENST00000614203 1594 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 Y_RNA.38-201ENST00000362617 102 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 RNY3P3-201ENST00000363816 102 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 SNORA80A-201ENST00000363922 136 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 SNORD56.5-201ENST00000364281 72 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 RNU5E-7P-201ENST00000365290 117 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 RNU4-20P-201ENST00000365601 151 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 MIR514A2-201ENST00000385131 88 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 MIR514A3-201ENST00000385132 88 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LDB1Q86U70 RNA5SP219-201ENST00000390940 113 ntBASIC2.63□□□□□ -1.99
LDB1Q86U70 MIR548F1-201ENST00000408667 84 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms