| ATG9A | Q7Z3C6 | AP005435.4-201 | ENST00000529514 | 284 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | MDM2-233 | ENST00000545204 | 398 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC020661.3-201 | ENST00000558101 | 414 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC005909.1-201 | ENST00000577835 | 755 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | MIR4801-201 | ENST00000582704 | 82 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC008739.2-201 | ENST00000597006 | 317 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | uc_338.34-201 | ENST00000617467 | 174 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | U6.42-201 | ENST00000618440 | 107 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC064859.1-201 | ENST00000624741 | 174 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | KERA-201 | ENST00000266719 | 2162 nt | APPRIS P1 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | EVI2A-201 | ENST00000247270 | 1860 nt | APPRIS P3 TSL 2 BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | MTND5P6-201 | ENST00000422338 | 1798 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | TSGA10-205 | ENST00000410001 | 3036 nt | APPRIS P2 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | Y_RNA.256-201 | ENST00000364594 | 104 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | RNU6-534P-201 | ENST00000364877 | 106 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | Y_RNA.381-201 | ENST00000365666 | 102 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | RNU6-434P-201 | ENST00000384376 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | MIR627-201 | ENST00000384979 | 97 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | TRAV41-201 | ENST00000390468 | 336 nt | APPRIS P1 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | TRAJ21-201 | ENST00000390516 | 55 nt | APPRIS P1 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AL117337.1-201 | ENST00000412789 | 444 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | RPL26P27-201 | ENST00000414397 | 437 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC016710.1-201 | ENST00000421326 | 466 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AP001117.1-201 | ENST00000428205 | 609 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | GYPB-201 | ENST00000429670 | 239 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | HMGB1P9-201 | ENST00000429856 | 646 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | GTF2IP20-201 | ENST00000431663 | 360 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AL139415.2-201 | ENST00000431968 | 163 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | LINC02041-201 | ENST00000440726 | 246 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AL118520.1-201 | ENST00000450770 | 291 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | ZEB1-AS1-204 | ENST00000450834 | 576 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | RPS27P27-201 | ENST00000498779 | 255 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC074124.1-201 | ENST00000502368 | 375 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC004054.1-201 | ENST00000515111 | 270 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | VTRNA2-2P-201 | ENST00000516091 | 103 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC068880.3-201 | ENST00000519185 | 179 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | NACAP3-201 | ENST00000552100 | 481 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | PCLAF-207 | ENST00000559519 | 749 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC092325.1-201 | ENST00000566449 | 554 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | HSPE1P7-201 | ENST00000604681 | 321 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AC007938.3-201 | ENST00000604965 | 623 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | Z82243.1-201 | ENST00000609432 | 473 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | MIR6715A-201 | ENST00000615929 | 79 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | AL109837.2-201 | ENST00000632608 | 295 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | GYPB-216 | ENST00000638448 | 363 nt | APPRIS P1 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | EFCAB5-213 | ENST00000638539 | 168 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | VPS54-202 | ENST00000354504 | 3594 nt | TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | HSPA4L-202 | ENST00000505726 | 2639 nt | TSL 2 BASIC | 2.9 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | MBNL3-205 | ENST00000370857 | 8760 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | CHD9-203 | ENST00000447540 | 11509 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.94 | | |
| ATG9A | Q7Z3C6 | VTRNA1-1-201 | ENST00000363120 | 99 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AKR1C1-201 | ENST00000380859 | 858 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | MTCO3P18-201 | ENST00000440206 | 761 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | HIGD1AP2-201 | ENST00000446367 | 280 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | TH2LCRR-203 | ENST00000457489 | 439 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC079467.1-201 | ENST00000508512 | 503 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | RNA5SP281-201 | ENST00000516504 | 135 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | BNIP3P6-201 | ENST00000549284 | 499 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC113137.1-201 | ENST00000591869 | 558 nt | TSL 4 BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC004852.3-201 | ENST00000614131 | 326 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AL354685.2-201 | ENST00000448218 | 1447 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC004520.1-201 | ENST00000608362 | 1413 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | HELLS-201 | ENST00000239026 | 2740 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | SEL1L2-201 | ENST00000284951 | 2224 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | MTND4P35-201 | ENST00000604257 | 1375 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | PSG8-202 | ENST00000401467 | 1686 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | PARPBP-201 | ENST00000327680 | 3014 nt | APPRIS P1 TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | SHOC2-201 | ENST00000265277 | 3691 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | RNU6-82P-201 | ENST00000363970 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | SNORA4.3-201 | ENST00000365564 | 137 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | RNU6-393P-201 | ENST00000384475 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | CD3D-202 | ENST00000392884 | 476 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | RNU6-1025P-201 | ENST00000410629 | 104 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | Z98742.3-201 | ENST00000418637 | 326 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AL138737.1-202 | ENST00000418834 | 876 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AL136322.1-201 | ENST00000422250 | 548 nt | TSL 4 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC093083.1-201 | ENST00000438633 | 347 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | RPS12P2-201 | ENST00000439728 | 269 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | BRK1P2-201 | ENST00000442875 | 223 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | TRAPPC2P3-201 | ENST00000443200 | 321 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | MTATP6P7-201 | ENST00000453315 | 681 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AL353780.1-201 | ENST00000455583 | 458 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | RNU7-180P-201 | ENST00000459240 | 63 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | MGC32805-203 | ENST00000506053 | 652 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | PRDX4P1-201 | ENST00000507189 | 574 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC008716.1-201 | ENST00000511084 | 513 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | HTN3-202 | ENST00000526767 | 578 nt | APPRIS P2 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AP000867.2-201 | ENST00000532468 | 320 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC007368.1-201 | ENST00000536422 | 974 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | LINC02305-201 | ENST00000554142 | 476 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC019183.1-201 | ENST00000580524 | 505 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AP000907.4-201 | ENST00000604143 | 237 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC079610.3-201 | ENST00000606960 | 147 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | U2.17-201 | ENST00000611454 | 95 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AL359198.2-201 | ENST00000611836 | 194 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| ATG9A | Q7Z3C6 | AC110079.1-202 | ENST00000635213 | 138 nt | BASIC | 2.89 | □□□□□ -1.95 | | |