Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 AL512637.2-201ENST00000431287 1256 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 RPL36AP53-201ENST00000432891 316 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 AC245102.2-201ENST00000448956 180 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 ZNF886P-201ENST00000450781 723 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 AC006512.1-201ENST00000468816 291 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 HMGN1P10-201ENST00000474557 553 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 SCARNA15.2-201ENST00000516409 127 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 SNORA62.5-201ENST00000516634 120 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 AL512347.1-201ENST00000566420 503 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 VN1R82P-201ENST00000601481 356 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 HSPE1P19-201ENST00000603327 295 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 OR4H6P-202ENST00000603819 340 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 FTX_3.1-201ENST00000610451 147 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 MIR6718-201ENST00000616153 80 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.5□□□□□ -2.33
CACNA1EQ15878 MTND2P41-201ENST00000637599 773 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CACNA1EQ15878 SGO1P1-201ENST00000603525 1447 ntBASIC0.5□□□□□ -2.33
CACNA1EQ15878 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 Y_RNA.67-201ENST00000362870 100 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 RNU6-853P-201ENST00000364306 107 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 RNU1-119P-201ENST00000391122 165 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL049734.2-201ENST00000441066 616 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 MTCO1P53-201ENST00000441633 699 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC027338.1-201ENST00000514840 825 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 RNA5SP112-201ENST00000515937 99 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC012414.6-201ENST00000568241 401 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 BNIP3P26-201ENST00000600827 554 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL022067.1-201ENST00000602426 454 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AP003485.1-201ENST00000625093 753 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CACNA1EQ15878 MIR558-201ENST00000384920 94 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 MIR146A-201ENST00000385201 99 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 RPL23AP32-201ENST00000395315 459 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL121978.1-201ENST00000402778 359 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL022718.1-201ENST00000412004 84 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC009310.1-201ENST00000414414 451 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL139421.1-201ENST00000423010 169 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 MTND4LP10-201ENST00000435146 291 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 LARP1BP2-201ENST00000486594 519 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC026414.1-201ENST00000504046 698 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL356432.3-201ENST00000568952 465 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC136932.1-201ENST00000574771 208 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC087045.1-201ENST00000605856 382 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL450270.1-201ENST00000606160 391 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL158211.4-201ENST00000606988 584 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL603758.1-201ENST00000618654 241 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC138627.2-201ENST00000624202 601 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 AL163152.1-201ENST00000642001 374 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.49□□□□□ -2.33
CACNA1EQ15878 AC005832.2-201ENST00000538921 1430 ntBASIC0.49□□□□□ -2.33
CACNA1EQ15878 snoU2_19.1-201ENST00000362361 80 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 RNU6-114P-201ENST00000384704 105 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 MTND3P20-201ENST00000407663 186 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 RNU2-33P-201ENST00000410344 192 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 DPRXP1-201ENST00000426312 460 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 AL590383.1-201ENST00000428602 75 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1EQ15878 USP9YP24-201ENST00000434374 697 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 RSU1P2-202ENST00000437884 485 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1EQ15878 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.48□□□□□ -2.33
CACNA1EQ15878 AC110760.3-202ENST00000515177 371 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.48□□□□□ -2.33
CACNA1EQ15878 AP003355.1-201ENST00000518956 587 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 CYCSP27-201ENST00000527643 293 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 AP003122.4-201ENST00000530980 758 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 SNRPGP1-201ENST00000553864 222 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 MIR3912-201ENST00000577566 105 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 VN1R88P-201ENST00000596787 292 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 AC098483.2-201ENST00000603158 454 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 U4atac.1-201ENST00000618345 95 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 AP000676.3-201ENST00000623299 569 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 AL138960.2-201ENST00000625145 535 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CACNA1EQ15878 FARSBP1-201ENST00000435808 1778 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 RNU6-216P-201ENST00000363282 104 ntBASIC0.48□□□□□ -2.33
CACNA1EQ15878 RNU5E-8P-201ENST00000363502 116 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms