Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 AL590556.1-201ENST00000423231 483 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AL591419.1-201ENST00000427423 339 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AL117339.2-201ENST00000430475 180 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AL627311.1-201ENST00000431514 115 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NR1I3Q14994 RPL21P39-201ENST00000463605 483 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AC010401.1-201ENST00000463867 348 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AC132942.1-201ENST00000486753 483 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AC093591.1-201ENST00000491435 481 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 RPL21P16-201ENST00000495531 483 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1I3Q14994 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1I3Q14994 AC110768.1-201ENST00000509222 400 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 RNU5B-3P-201ENST00000516601 115 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 SCARNA24.2-201ENST00000516968 130 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 RNA5SP290-201ENST00000517133 127 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 HIGD1AP5-201ENST00000529959 259 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
NR1I3Q14994 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1I3Q14994 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.94□□□□□ -1.78
NR1I3Q14994 CYCSP30-201ENST00000546447 172 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AC093023.1-201ENST00000547375 507 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AC004024.1-201ENST00000549244 247 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1I3Q14994 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1I3Q14994 AL442163.3-201ENST00000554110 156 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.94□□□□□ -1.78
NR1I3Q14994 AL606490.9-201ENST00000603331 271 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 MIR6820-201ENST00000611508 62 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 AC004792.1-201ENST00000614523 137 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.94□□□□□ -1.78
NR1I3Q14994 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.94□□□□□ -1.78
NR1I3Q14994 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.94□□□□□ -1.78
NR1I3Q14994 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NR1I3Q14994 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1I3Q14994 AL136964.1-201ENST00000622038 2990 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AL365440.1-201ENST00000436135 2167 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NR1I3Q14994 Y_RNA.29-201ENST00000362570 113 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 Y_RNA.269-201ENST00000364685 89 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AP002088.1-201ENST00000382740 395 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 RNU1-13P-201ENST00000384499 162 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 SNORA19-201ENST00000384737 128 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 MIR30B-201ENST00000384850 88 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AP000275.1-201ENST00000411943 390 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.93□□□□□ -1.78
NR1I3Q14994 TOMM22P1-201ENST00000418578 312 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AC007560.1-201ENST00000426912 237 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1I3Q14994 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1I3Q14994 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
NR1I3Q14994 RNU2-27P-201ENST00000516185 142 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 RNU6-1338P-201ENST00000516328 91 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 SCARNA15.2-201ENST00000516409 127 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 SNORA31.19-201ENST00000517079 126 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AP004371.1-201ENST00000525240 214 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 MIR5187-201ENST00000583479 76 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 MIR4443-201ENST00000585052 53 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AC005255.1-201ENST00000593748 216 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AC004825.2-201ENST00000616634 455 ntBASIC3.93□□□□□ -1.78
NR1I3Q14994 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1I3Q14994 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
NR1I3Q14994 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1I3Q14994 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NR1I3Q14994 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1I3Q14994 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NR1I3Q14994 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
NR1I3Q14994 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1I3Q14994 Y_RNA.270-201ENST00000364693 104 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 Y_RNA.352-201ENST00000365439 102 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NR1I3Q14994 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1I3Q14994 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1I3Q14994 AC244098.2-201ENST00000422068 99 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NR1I3Q14994 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.92□□□□□ -1.78
NR1I3Q14994 OR4C10P-201ENST00000434991 931 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 RN7SKP210-201ENST00000459176 261 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 AC010285.1-201ENST00000470580 392 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 RPL21P13-201ENST00000488305 481 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 AL160314.1-201ENST00000490836 438 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1I3Q14994 RAB9BP1-201ENST00000519581 626 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.92□□□□□ -1.78
NR1I3Q14994 MED28P6-201ENST00000558776 231 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.92□□□□□ -1.78
NR1I3Q14994 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1I3Q14994 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.92□□□□□ -1.78
NR1I3Q14994 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.92□□□□□ -1.78
NR1I3Q14994 MIR6830-201ENST00000636015 70 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1I3Q14994 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NR1I3Q14994 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1I3Q14994 AC008725.1-201ENST00000605123 2263 ntBASIC3.92□□□□□ -1.78
NR1I3Q14994 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NR1I3Q14994 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.91□□□□□ -1.78
NR1I3Q14994 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NR1I3Q14994 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.91□□□□□ -1.78
NR1I3Q14994 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms