Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 U6atac.1-201ENST00000616025 117 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 MTND4P5-201ENST00000435821 1374 ntBASIC3.07□□□□□ -1.92
UBE3AQ05086 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
UBE3AQ05086 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBE3AQ05086 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBE3AQ05086 Y_RNA.89-201ENST00000363031 102 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 RNU6-82P-201ENST00000363970 107 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 RNU6-266P-201ENST00000364225 107 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 MIR514A2-201ENST00000385131 88 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 MIR514A3-201ENST00000385132 88 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBE3AQ05086 OR9R1P-201ENST00000412200 877 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 SNRPEP10-201ENST00000420249 274 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.06□□□□□ -1.92
UBE3AQ05086 SAR1AP4-201ENST00000429225 591 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.06□□□□□ -1.92
UBE3AQ05086 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.06□□□□□ -1.92
UBE3AQ05086 RPS26P21-201ENST00000475397 348 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 AC092989.1-201ENST00000481235 277 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 RNU5F-8P-201ENST00000515941 111 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 RNU6-189P-201ENST00000516120 101 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 RN7SKP282-201ENST00000516824 299 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 AC069113.1-201ENST00000517763 267 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.06□□□□□ -1.92
UBE3AQ05086 AC090115.3-201ENST00000553218 849 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 AL118558.2-201ENST00000556294 238 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 VN1R80P-201ENST00000597126 338 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 AC092747.3-201ENST00000603769 301 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 AC092794.1-201ENST00000612734 582 ntBASIC3.06□□□□□ -1.92
UBE3AQ05086 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
UBE3AQ05086 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBE3AQ05086 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBE3AQ05086 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBE3AQ05086 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
UBE3AQ05086 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBE3AQ05086 AC138915.1-201ENST00000565427 1685 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3AQ05086 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBE3AQ05086 RNU6-859P-201ENST00000362728 107 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 Y_RNA.378-201ENST00000365652 113 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 RNU6-1083P-201ENST00000384022 107 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
UBE3AQ05086 RNA5SP508-201ENST00000411327 119 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 POLHP1-201ENST00000411806 470 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE3AQ05086 RPLP0P7-201ENST00000416050 667 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL513477.1-202ENST00000417061 214 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 ERLEC1P1-201ENST00000433806 578 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.05□□□□□ -1.92
UBE3AQ05086 HMGB1P31-201ENST00000437242 427 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AC012308.1-201ENST00000451232 178 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.05□□□□□ -1.92
UBE3AQ05086 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.05□□□□□ -1.92
UBE3AQ05086 Y_RNA.654-201ENST00000497848 106 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 SNORA25.17-201ENST00000517184 124 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 SCARNA11.3-201ENST00000517276 130 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AC079600.2-201ENST00000550076 130 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3AQ05086 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3AQ05086 AC008121.1-201ENST00000603244 268 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL670379.10-201ENST00000604330 253 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL670379.9-201ENST00000605428 253 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3AQ05086 Z69720.2-201ENST00000624755 279 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3AQ05086 MIR7515-201ENST00000637837 67 ntBASIC3.05□□□□□ -1.92
UBE3AQ05086 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.05□□□□□ -1.92
UBE3AQ05086 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBE3AQ05086 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
UBE3AQ05086 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBE3AQ05086 RNU6-942P-201ENST00000363002 107 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 Y_RNA.295-201ENST00000364918 102 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 RNU5E-7P-201ENST00000365290 117 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.04□□□□□ -1.92
UBE3AQ05086 AL365400.1-201ENST00000431854 640 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AL513043.1-201ENST00000439124 535 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.04□□□□□ -1.92
UBE3AQ05086 MED28P2-201ENST00000475771 317 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UBE3AQ05086 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.04□□□□□ -1.92
UBE3AQ05086 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.04□□□□□ -1.92
UBE3AQ05086 TBCAP3-201ENST00000512475 312 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 SNORA31.26-201ENST00000517250 137 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 MTND4LP26-201ENST00000518144 282 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.04□□□□□ -1.92
UBE3AQ05086 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
UBE3AQ05086 CYCSP27-201ENST00000527643 293 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AP002770.2-201ENST00000543613 532 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.04□□□□□ -1.92
UBE3AQ05086 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.04□□□□□ -1.92
UBE3AQ05086 AC009163.5-201ENST00000575421 637 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AC078899.3-201ENST00000599065 212 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 RNU6-89P-201ENST00000606519 100 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 AC092807.2-201ENST00000609367 243 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 uc_338.14-201ENST00000613162 166 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 MIR6715A-201ENST00000615929 79 ntBASIC3.04□□□□□ -1.92
UBE3AQ05086 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
UBE3AQ05086 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UBE3AQ05086 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms