Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL591034.2-201ENST00000402839 359 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 MIR1262-201ENST00000408276 93 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.4□□□□□ -2.34
SCN7AQ01118 MRPS36P1-201ENST00000421291 307 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 EIF1P1-201ENST00000421436 341 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.4□□□□□ -2.34
SCN7AQ01118 AC013267.1-201ENST00000458227 267 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 SNORD124-201ENST00000459577 104 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 AC145146.1-201ENST00000496370 254 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 SMURF2P1-201ENST00000514992 481 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 SNORA31.17-201ENST00000516953 127 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 MIR3167-201ENST00000579623 85 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 AC091152.3-201ENST00000604227 325 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 RNU6-91P-201ENST00000607774 107 ntBASIC0.4□□□□□ -2.34
SCN7AQ01118 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.4□□□□□ -2.34
SCN7AQ01118 MTCO1P56-201ENST00000401674 224 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 FAM204CP-201ENST00000424489 642 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN7AQ01118 AC114982.1-201ENST00000469402 321 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 RNA5SP285-201ENST00000516619 119 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.4□□□□□ -2.35
SCN7AQ01118 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.4□□□□□ -2.35
SCN7AQ01118 ROCK1P1-201ENST00000573767 549 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.4□□□□□ -2.35
SCN7AQ01118 BNIP3P16-201ENST00000589779 534 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 AL022345.2-201ENST00000606307 135 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 AC013476.2-201ENST00000614456 459 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 MIR6718-201ENST00000616153 80 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 AC002550.2-201ENST00000621246 394 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 AC119674.1-220ENST00000641502 1048 ntBASIC0.4□□□□□ -2.35
SCN7AQ01118 MIR1912-201ENST00000410389 80 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 PTGES3P4-201ENST00000426243 356 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN7AQ01118 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.39□□□□□ -2.35
SCN7AQ01118 AC091435.1-201ENST00000505442 584 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 PTP4A1P4-201ENST00000512479 322 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN7AQ01118 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN7AQ01118 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.39□□□□□ -2.35
SCN7AQ01118 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN7AQ01118 EIF4A1P12-201ENST00000551910 141 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN7AQ01118 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.39□□□□□ -2.35
SCN7AQ01118 VN1R88P-201ENST00000596787 292 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 MZT1P2-201ENST00000604387 248 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 AC006213.5-201ENST00000619673 288 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 AL159972.1-201ENST00000625150 448 ntBASIC0.39□□□□□ -2.35
SCN7AQ01118 AC134026.1-201ENST00000623249 2239 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 ENSAP3-201ENST00000312710 333 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 Y_RNA.518-201ENST00000384552 113 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 AC078974.1-201ENST00000411597 223 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SCN7AQ01118 AC132479.1-201ENST00000449160 144 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 AC112771.1-201ENST00000463581 102 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 AC087477.1-201ENST00000465747 340 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN7AQ01118 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN7AQ01118 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.38□□□□□ -2.35
SCN7AQ01118 AL590705.4-201ENST00000532209 134 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.38□□□□□ -2.35
SCN7AQ01118 BBIP1P1-201ENST00000602999 279 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 AC112220.3-201ENST00000605502 502 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.38□□□□□ -2.35
SCN7AQ01118 uc_338.17-201ENST00000619633 179 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.38□□□□□ -2.35
SCN7AQ01118 SEC63P2-201ENST00000503863 1939 ntBASIC0.38□□□□□ -2.35
SCN7AQ01118 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 SNORD115-3-201ENST00000363100 82 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RNU6-611P-201ENST00000384276 104 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 MIR329-2-201ENST00000385029 84 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AL031577.2-201ENST00000404133 280 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RNU2-64P-201ENST00000411315 191 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AL592310.1-201ENST00000414330 671 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN7AQ01118 SNRPEP9-201ENST00000436794 238 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RPS15AP9-201ENST00000439856 381 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 MEMO1P3-201ENST00000459811 302 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RPS27P22-201ENST00000478056 241 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RAP1BP2-201ENST00000478270 544 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AL163195.1-201ENST00000496941 348 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN7AQ01118 SNORA25.11-201ENST00000515935 105 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AC109329.1-201ENST00000518744 317 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN7AQ01118 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.37□□□□□ -2.35
SCN7AQ01118 AC007792.1-201ENST00000623023 402 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AC009033.1-201ENST00000624279 431 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SCN7AQ01118 MIR19B1-201ENST00000384829 87 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 MIR525-201ENST00000384978 85 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RPL22P22-201ENST00000395439 379 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RNU6-77P-201ENST00000410554 91 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 PSMA6P3-201ENST00000428242 164 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.37□□□□□ -2.35
SCN7AQ01118 HSPE1P13-201ENST00000451143 297 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AC084024.2-201ENST00000503480 791 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 RNU6-889P-201ENST00000517189 103 ntBASIC0.37□□□□□ -2.35
SCN7AQ01118 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms