Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC097473.1-201ENST00000508142 408 ntBASIC3.08□□□□□ -1.92
RAE1P78406 PTP4A1P4-201ENST00000512479 322 ntBASIC3.08□□□□□ -1.92
RAE1P78406 RNU6-377P-201ENST00000515965 102 ntBASIC3.08□□□□□ -1.92
RAE1P78406 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.08□□□□□ -1.92
RAE1P78406 SNORA67.7-201ENST00000516664 135 ntBASIC3.08□□□□□ -1.92
RAE1P78406 ANP32BP3-201ENST00000559213 706 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.08□□□□□ -1.92
RAE1P78406 MIR2682-201ENST00000580305 110 ntBASIC3.08□□□□□ -1.92
RAE1P78406 MIR3158-1-201ENST00000583596 81 ntBASIC3.08□□□□□ -1.92
RAE1P78406 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AL451007.1-201ENST00000595491 289 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AC024153.1-201ENST00000603103 365 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AC005046.1-201ENST00000608515 625 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AC004852.3-201ENST00000614131 326 ntBASIC3.08□□□□□ -1.92
RAE1P78406 AC091903.1-201ENST00000624322 454 ntBASIC3.08□□□□□ -1.92
RAE1P78406 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.08□□□□□ -1.92
RAE1P78406 AC134503.1-201ENST00000633048 54 ntBASIC3.08□□□□□ -1.92
RAE1P78406 MIR7153-201ENST00000637758 57 ntBASIC3.08□□□□□ -1.92
RAE1P78406 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAE1P78406 AL355596.1-201ENST00000565399 3996 ntBASIC3.08□□□□□ -1.92
RAE1P78406 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAE1P78406 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RAE1P78406 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RAE1P78406 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
RAE1P78406 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAE1P78406 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
RAE1P78406 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAE1P78406 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAE1P78406 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAE1P78406 RNA5SP383-201ENST00000362934 120 ntBASIC3.07□□□□□ -1.92
RAE1P78406 RNU6-942P-201ENST00000363002 107 ntBASIC3.07□□□□□ -1.92
RAE1P78406 RNU1-100P-201ENST00000365255 165 ntBASIC3.07□□□□□ -1.92
RAE1P78406 RNU6-596P-201ENST00000365395 98 ntBASIC3.07□□□□□ -1.92
RAE1P78406 RNU6-805P-201ENST00000365643 106 ntBASIC3.07□□□□□ -1.92
RAE1P78406 Y_RNA.404-201ENST00000383978 102 ntBASIC3.07□□□□□ -1.92
RAE1P78406 RNU6-198P-201ENST00000384258 104 ntBASIC3.07□□□□□ -1.92
RAE1P78406 RPS29P13-201ENST00000402041 169 ntBASIC3.07□□□□□ -1.92
RAE1P78406 USMG5P1-201ENST00000425964 177 ntBASIC3.07□□□□□ -1.92
RAE1P78406 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.07□□□□□ -1.92
RAE1P78406 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RAE1P78406 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.07□□□□□ -1.92
RAE1P78406 RNU7-23P-201ENST00000459465 62 ntBASIC3.07□□□□□ -1.92
RAE1P78406 U8.21-201ENST00000459536 136 ntBASIC3.07□□□□□ -1.92
RAE1P78406 RPL7P42-201ENST00000481005 679 ntBASIC3.07□□□□□ -1.92
RAE1P78406 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.07□□□□□ -1.92
RAE1P78406 AK3P2-201ENST00000507976 429 ntBASIC3.07□□□□□ -1.92
RAE1P78406 SNORA31.1-201ENST00000515993 133 ntBASIC3.07□□□□□ -1.92
RAE1P78406 SNORA31.5-201ENST00000516190 133 ntBASIC3.07□□□□□ -1.92
RAE1P78406 SNORA43.2-201ENST00000516652 128 ntBASIC3.07□□□□□ -1.92
RAE1P78406 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.07□□□□□ -1.92
RAE1P78406 CBX3P7-201ENST00000532876 502 ntBASIC3.07□□□□□ -1.92
RAE1P78406 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.07□□□□□ -1.92
RAE1P78406 AC103996.1-201ENST00000555468 102 ntBASIC3.07□□□□□ -1.92
RAE1P78406 AL121821.2-201ENST00000556081 394 ntBASIC3.07□□□□□ -1.92
RAE1P78406 AC024220.1-201ENST00000603675 484 ntBASIC3.07□□□□□ -1.92
RAE1P78406 AL080274.1-201ENST00000605565 220 ntBASIC3.07□□□□□ -1.92
RAE1P78406 AC006133.1-201ENST00000617106 264 ntBASIC3.07□□□□□ -1.92
RAE1P78406 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RAE1P78406 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RAE1P78406 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RAE1P78406 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.07□□□□□ -1.92
RAE1P78406 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.07□□□□□ -1.92
RAE1P78406 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.07□□□□□ -1.92
RAE1P78406 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RAE1P78406 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.07□□□□□ -1.92
RAE1P78406 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RAE1P78406 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RAE1P78406 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
RAE1P78406 RNU6-428P-201ENST00000362942 107 ntBASIC3.06□□□□□ -1.92
RAE1P78406 RNU6-1059P-201ENST00000363752 98 ntBASIC3.06□□□□□ -1.92
RAE1P78406 SNORA62.3-201ENST00000365110 153 ntBASIC3.06□□□□□ -1.92
RAE1P78406 Y_RNA.395-201ENST00000383945 109 ntBASIC3.06□□□□□ -1.92
RAE1P78406 Y_RNA.473-201ENST00000384333 102 ntBASIC3.06□□□□□ -1.92
RAE1P78406 RNU6-790P-201ENST00000384479 105 ntBASIC3.06□□□□□ -1.92
RAE1P78406 SNORA75.6-201ENST00000391318 127 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AL513475.1-201ENST00000406602 315 ntBASIC3.06□□□□□ -1.92
RAE1P78406 MIR548P-201ENST00000408336 84 ntBASIC3.06□□□□□ -1.92
RAE1P78406 MTND5P19-201ENST00000424872 1794 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AC005300.1-201ENST00000428401 373 ntBASIC3.06□□□□□ -1.92
RAE1P78406 ARF4P2-201ENST00000430209 526 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.06□□□□□ -1.92
RAE1P78406 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.06□□□□□ -1.92
RAE1P78406 CYCSP32-201ENST00000440548 321 ntBASIC3.06□□□□□ -1.92
RAE1P78406 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.06□□□□□ -1.92
RAE1P78406 AC125238.1-201ENST00000448842 249 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.06□□□□□ -1.92
RAE1P78406 AP002884.2-201ENST00000471647 395 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AC010265.1-201ENST00000513509 211 ntBASIC3.06□□□□□ -1.92
RAE1P78406 RNA5SP217-201ENST00000515959 91 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.06□□□□□ -1.92
RAE1P78406 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AC109446.1-201ENST00000566172 220 ntBASIC3.06□□□□□ -1.92
RAE1P78406 VN1R107P-201ENST00000601784 209 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AC018889.1-201ENST00000605372 397 ntBASIC3.06□□□□□ -1.92
RAE1P78406 AC073657.2-201ENST00000605661 303 ntBASIC3.06□□□□□ -1.92
RAE1P78406 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.06□□□□□ -1.92
RAE1P78406 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.06□□□□□ -1.92
RAE1P78406 AC093908.1-201ENST00000623125 8092 ntBASIC3.06□□□□□ -1.92
RAE1P78406 GABRG2-229ENST00000641017 3628 ntBASIC3.05□□□□□ -1.92
RAE1P78406 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms