Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCNA1P78396 RNU6-660P-201ENST00000364566 109 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 SNORA8-201ENST00000384574 139 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 SNORA40C-201ENST00000391285 128 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 AL591034.2-201ENST00000402839 359 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 ELOCP17-201ENST00000414751 326 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.93□□□□□ -2.1
CCNA1P78396 MTND1P20-201ENST00000430341 950 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.93□□□□□ -2.1
CCNA1P78396 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.93□□□□□ -2.1
CCNA1P78396 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.93□□□□□ -2.1
CCNA1P78396 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.93□□□□□ -2.1
CCNA1P78396 AC034244.1-201ENST00000507687 207 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.93□□□□□ -2.1
CCNA1P78396 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.93□□□□□ -2.1
CCNA1P78396 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.93□□□□□ -2.1
CCNA1P78396 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
CCNA1P78396 AC174048.1-201ENST00000603389 144 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 NDUFA8P1-201ENST00000605525 367 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 AC108747.1-201ENST00000609508 535 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.93□□□□□ -2.1
CCNA1P78396 AL365204.3-201ENST00000612448 685 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 MIR3529-201ENST00000637713 78 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 MTND5P42-201ENST00000637720 498 ntBASIC1.93□□□□□ -2.1
CCNA1P78396 AC006026.1-201ENST00000444025 1803 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 Y_RNA.18-201ENST00000362461 102 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 RNU6-1010P-201ENST00000362757 107 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 RNU1-23P-201ENST00000363361 144 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 RNU6-1200P-201ENST00000384162 107 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 TIMM9P1-201ENST00000436122 256 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.92□□□□□ -2.1
CCNA1P78396 AC006512.1-201ENST00000468816 291 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 MTND1P3-201ENST00000484956 952 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNA1P78396 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNA1P78396 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNA1P78396 MTND2P32-201ENST00000521584 1038 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 AC087441.2-201ENST00000529141 262 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNA1P78396 IMMP1LP2-201ENST00000552954 492 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 AL354943.1-201ENST00000572103 781 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 AC021755.4-201ENST00000616620 456 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 AC099842.1-201ENST00000619919 596 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 AC092656.1-203ENST00000624134 423 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 MTND4P23-201ENST00000447723 1363 ntBASIC1.92□□□□□ -2.1
CCNA1P78396 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCNA1P78396 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.92□□□□□ -2.1
CCNA1P78396 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCNA1P78396 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCNA1P78396 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNA1P78396 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
CCNA1P78396 HAUS6P2-201ENST00000433254 2404 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCNA1P78396 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCNA1P78396 AC009518.2-201ENST00000418056 731 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 RPS15AP12-201ENST00000419498 388 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.91□□□□□ -2.1
CCNA1P78396 RPL31P63-201ENST00000422565 375 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNA1P78396 AL354941.1-201ENST00000438600 464 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNA1P78396 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
CCNA1P78396 RNU7-95P-201ENST00000459222 64 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 RNU6-667P-201ENST00000517186 102 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 DUXAP5-201ENST00000529668 529 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNA1P78396 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNA1P78396 HSBP1P1-201ENST00000555205 166 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 AL356432.3-201ENST00000568952 465 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.91□□□□□ -2.1
CCNA1P78396 AC103987.3-201ENST00000582071 292 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 MIR4307-201ENST00000582802 84 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
CCNA1P78396 AL031667.3-201ENST00000620124 655 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 U1.36-201ENST00000620684 176 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 AP002782.1-201ENST00000623107 614 ntBASIC1.91□□□□□ -2.1
CCNA1P78396 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.91□□□□□ -2.1
CCNA1P78396 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCNA1P78396 AL391994.1-201ENST00000254724 282 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 RNU6-858P-201ENST00000362436 107 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 Y_RNA.46-201ENST00000362695 102 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 Y_RNA.97-201ENST00000363094 102 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 RNU6-395P-201ENST00000365662 106 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCNA1P78396 FTH1P15-201ENST00000406984 280 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 RNU6-1025P-201ENST00000410629 104 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNA1P78396 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.9□□□□□ -2.11
CCNA1P78396 AL591212.2-201ENST00000433923 257 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.9□□□□□ -2.11
CCNA1P78396 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNA1P78396 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCNA1P78396 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.9□□□□□ -2.11
CCNA1P78396 CBX3P4-201ENST00000538909 354 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 AL157871.3-201ENST00000557231 293 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms