Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CR383656.8-201ENST00000549046 145 ntBASIC3.8□□□□□ -1.8
GABREP78334 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.8□□□□□ -1.8
GABREP78334 AC104695.3-201ENST00000604052 296 ntBASIC3.8□□□□□ -1.8
GABREP78334 AC091167.4-201ENST00000605079 184 ntBASIC3.8□□□□□ -1.8
GABREP78334 SNORD58B-201ENST00000607313 66 ntBASIC3.8□□□□□ -1.8
GABREP78334 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.8□□□□□ -1.8
GABREP78334 AC024581.2-201ENST00000619986 252 ntBASIC3.8□□□□□ -1.8
GABREP78334 AC006111.3-201ENST00000622137 383 ntBASIC3.8□□□□□ -1.8
GABREP78334 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
GABREP78334 AC008669.1-201ENST00000565823 2178 ntBASIC3.8□□□□□ -1.8
GABREP78334 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GABREP78334 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
GABREP78334 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GABREP78334 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.8□□□□□ -1.8
GABREP78334 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.8□□□□□ -1.8
GABREP78334 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
GABREP78334 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GABREP78334 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.79□□□□□ -1.8
GABREP78334 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABREP78334 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.79□□□□□ -1.8
GABREP78334 AC073346.2-201ENST00000624724 2058 ntBASIC3.79□□□□□ -1.8
GABREP78334 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.79□□□□□ -1.8
GABREP78334 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GABREP78334 Y_RNA.424-201ENST00000384063 103 ntBASIC3.79□□□□□ -1.8
GABREP78334 RNU6-198P-201ENST00000384258 104 ntBASIC3.79□□□□□ -1.8
GABREP78334 Y_RNA.645-201ENST00000391229 102 ntBASIC3.79□□□□□ -1.8
GABREP78334 SNORA11.2-201ENST00000408318 127 ntBASIC3.79□□□□□ -1.8
GABREP78334 SNORA3.3-201ENST00000408712 125 ntBASIC3.79□□□□□ -1.8
GABREP78334 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.79□□□□□ -1.8
GABREP78334 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.79□□□□□ -1.8
GABREP78334 HLA-N-201ENST00000437516 135 ntBASIC3.79□□□□□ -1.8
GABREP78334 AC243964.1-201ENST00000441814 261 ntBASIC3.79□□□□□ -1.8
GABREP78334 MTATP8P1-201ENST00000467115 207 ntBASIC3.79□□□□□ -1.8
GABREP78334 RNU6-475P-201ENST00000516073 104 ntBASIC3.79□□□□□ -1.8
GABREP78334 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.79□□□□□ -1.8
GABREP78334 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.79□□□□□ -1.8
GABREP78334 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.79□□□□□ -1.8
GABREP78334 MIR5701-3-201ENST00000578890 82 ntBASIC3.79□□□□□ -1.8
GABREP78334 MIR3200-201ENST00000580767 85 ntBASIC3.79□□□□□ -1.8
GABREP78334 MIR5701-1-201ENST00000585138 82 ntBASIC3.79□□□□□ -1.8
GABREP78334 MIR432-201ENST00000606207 94 ntBASIC3.79□□□□□ -1.8
GABREP78334 U3.45-201ENST00000607547 219 ntBASIC3.79□□□□□ -1.8
GABREP78334 MIR5701-2-201ENST00000615634 82 ntBASIC3.79□□□□□ -1.8
GABREP78334 AL138880.2-201ENST00000616214 239 ntBASIC3.79□□□□□ -1.8
GABREP78334 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
GABREP78334 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
GABREP78334 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
GABREP78334 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
GABREP78334 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
GABREP78334 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.78□□□□□ -1.8
GABREP78334 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.78□□□□□ -1.8
GABREP78334 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABREP78334 ZNF72P-201ENST00000425869 1908 ntBASIC3.78□□□□□ -1.8
GABREP78334 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.78□□□□□ -1.8
GABREP78334 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABREP78334 Y_RNA.133-201ENST00000363428 110 ntBASIC3.78□□□□□ -1.8
GABREP78334 RNU6-450P-201ENST00000364654 107 ntBASIC3.78□□□□□ -1.8
GABREP78334 RNU4-42P-201ENST00000364738 142 ntBASIC3.78□□□□□ -1.8
GABREP78334 RNU1-140P-201ENST00000365040 165 ntBASIC3.78□□□□□ -1.8
GABREP78334 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
GABREP78334 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABREP78334 Z98941.1-201ENST00000407764 100 ntBASIC3.78□□□□□ -1.8
GABREP78334 RNU6-101P-201ENST00000410323 104 ntBASIC3.78□□□□□ -1.8
GABREP78334 AC074117.2-201ENST00000417130 397 ntBASIC3.78□□□□□ -1.8
GABREP78334 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.78□□□□□ -1.8
GABREP78334 OR2AQ1P-201ENST00000451972 200 ntBASIC3.78□□□□□ -1.8
GABREP78334 MED28P2-201ENST00000475771 317 ntBASIC3.78□□□□□ -1.8
GABREP78334 Y_RNA.721-201ENST00000517207 102 ntBASIC3.78□□□□□ -1.8
GABREP78334 AC144568.1-201ENST00000520139 137 ntBASIC3.78□□□□□ -1.8
GABREP78334 AL590705.4-201ENST00000532209 134 ntBASIC3.78□□□□□ -1.8
GABREP78334 AC069240.1-201ENST00000548774 375 ntBASIC3.78□□□□□ -1.8
GABREP78334 AL117187.1-201ENST00000555482 181 ntBASIC3.78□□□□□ -1.8
GABREP78334 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.78□□□□□ -1.8
GABREP78334 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
GABREP78334 7SK.7-201ENST00000603504 247 ntBASIC3.78□□□□□ -1.8
GABREP78334 AC019159.1-201ENST00000605094 187 ntBASIC3.78□□□□□ -1.8
GABREP78334 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.78□□□□□ -1.8
GABREP78334 AL138825.1-201ENST00000618587 192 ntBASIC3.78□□□□□ -1.8
GABREP78334 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.78□□□□□ -1.8
GABREP78334 MIR4272-201ENST00000635924 64 ntBASIC3.78□□□□□ -1.8
GABREP78334 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.78□□□□□ -1.8
GABREP78334 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
GABREP78334 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.78□□□□□ -1.8
GABREP78334 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.78□□□□□ -1.81
GABREP78334 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
GABREP78334 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GABREP78334 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
GABREP78334 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
GABREP78334 AC110774.1-201ENST00000623567 2018 ntBASIC3.77□□□□□ -1.81
GABREP78334 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
GABREP78334 RHOT1P2-201ENST00000366423 333 ntBASIC3.77□□□□□ -1.81
GABREP78334 RNA5SP494-201ENST00000410653 129 ntBASIC3.77□□□□□ -1.81
GABREP78334 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.77□□□□□ -1.81
GABREP78334 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.77□□□□□ -1.81
GABREP78334 RNU7-143P-201ENST00000516781 65 ntBASIC3.77□□□□□ -1.81
GABREP78334 IGHV3-76-201ENST00000522465 295 ntBASIC3.77□□□□□ -1.81
GABREP78334 AC008269.2-201ENST00000561915 1105 ntBASIC3.77□□□□□ -1.81
GABREP78334 AC009163.5-201ENST00000575421 637 ntBASIC3.77□□□□□ -1.81
GABREP78334 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
GABREP78334 AC020914.4-201ENST00000597690 277 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms