Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU4-91P-201ENST00000364778 135 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-744P-201ENST00000365557 107 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-1316P-201ENST00000384242 108 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-622P-201ENST00000384272 103 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-166P-201ENST00000384371 107 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-253P-201ENST00000384730 105 ntBASIC0.48□□□□□ -2.33
RPS28P62857 MIR19B1-201ENST00000384829 87 ntBASIC0.48□□□□□ -2.33
RPS28P62857 MIR301A-201ENST00000385261 86 ntBASIC0.48□□□□□ -2.33
RPS28P62857 SNORA40.6-201ENST00000391153 128 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.48□□□□□ -2.33
RPS28P62857 Y_RNA.625-201ENST00000411256 107 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RPS3AP1-201ENST00000413190 320 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.48□□□□□ -2.33
RPS28P62857 RPS26P5-201ENST00000418544 335 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RPS28P62857 MTCO2P25-201ENST00000447065 681 ntBASIC0.48□□□□□ -2.33
RPS28P62857 snoU13.30-201ENST00000458951 104 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-333P-201ENST00000459117 107 ntBASIC0.48□□□□□ -2.33
RPS28P62857 SETP6-201ENST00000479329 568 ntBASIC0.48□□□□□ -2.33
RPS28P62857 BET1P1-201ENST00000482276 359 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AC068587.1-201ENST00000483613 781 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RPL39P36-201ENST00000490784 156 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AC106872.3-201ENST00000495104 446 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-250P-201ENST00000516958 103 ntBASIC0.48□□□□□ -2.33
RPS28P62857 RNU1-92P-201ENST00000517017 135 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AC025423.5-201ENST00000550230 219 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AC025678.1-201ENST00000567861 338 ntBASIC0.48□□□□□ -2.33
RPS28P62857 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.48□□□□□ -2.33
RPS28P62857 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.48□□□□□ -2.33
RPS28P62857 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.48□□□□□ -2.33
RPS28P62857 ZNF92P2-201ENST00000600543 1059 ntBASIC0.48□□□□□ -2.33
RPS28P62857 AC073413.2-201ENST00000604332 360 ntBASIC0.48□□□□□ -2.33
RPS28P62857 SNORD114-21-201ENST00000606412 72 ntBASIC0.48□□□□□ -2.33
RPS28P62857 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.48□□□□□ -2.33
RPS28P62857 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
RPS28P62857 RNU6-792P-201ENST00000363490 107 ntBASIC0.47□□□□□ -2.33
RPS28P62857 RNA5SP88-201ENST00000365560 109 ntBASIC0.47□□□□□ -2.33
RPS28P62857 MIR141-201ENST00000384975 95 ntBASIC0.47□□□□□ -2.33
RPS28P62857 AL356776.1-201ENST00000406574 447 ntBASIC0.47□□□□□ -2.33
RPS28P62857 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.47□□□□□ -2.33
RPS28P62857 AC009963.1-201ENST00000417265 157 ntBASIC0.47□□□□□ -2.33
RPS28P62857 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.47□□□□□ -2.33
RPS28P62857 AC013262.1-201ENST00000426710 252 ntBASIC0.47□□□□□ -2.33
RPS28P62857 MTND5P15-201ENST00000434246 349 ntBASIC0.47□□□□□ -2.33
RPS28P62857 MTND5P14-201ENST00000441481 1267 ntBASIC0.47□□□□□ -2.33
RPS28P62857 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.47□□□□□ -2.33
RPS28P62857 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.47□□□□□ -2.33
RPS28P62857 SNORD124-201ENST00000459577 104 ntBASIC0.47□□□□□ -2.33
RPS28P62857 FTH1P2-201ENST00000466086 412 ntBASIC0.47□□□□□ -2.33
RPS28P62857 RPS26P45-201ENST00000471748 340 ntBASIC0.47□□□□□ -2.33
RPS28P62857 AC074344.1-201ENST00000512823 224 ntBASIC0.47□□□□□ -2.33
RPS28P62857 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC0.47□□□□□ -2.33
RPS28P62857 AC068790.6-201ENST00000602558 258 ntBASIC0.47□□□□□ -2.33
RPS28P62857 SRGNP1-201ENST00000603392 451 ntBASIC0.47□□□□□ -2.33
RPS28P62857 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.47□□□□□ -2.33
RPS28P62857 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.47□□□□□ -2.33
RPS28P62857 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.47□□□□□ -2.33
RPS28P62857 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
RPS28P62857 AL079343.1-201ENST00000572358 1771 ntBASIC0.47□□□□□ -2.33
RPS28P62857 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
RPS28P62857 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.46□□□□□ -2.34
RPS28P62857 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
RPS28P62857 RNU6-1025P-201ENST00000410629 104 ntBASIC0.46□□□□□ -2.34
RPS28P62857 AC063976.4-201ENST00000421971 163 ntBASIC0.46□□□□□ -2.34
RPS28P62857 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.46□□□□□ -2.34
RPS28P62857 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
RPS28P62857 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.46□□□□□ -2.34
RPS28P62857 AC087441.2-201ENST00000529141 262 ntBASIC0.46□□□□□ -2.34
RPS28P62857 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.46□□□□□ -2.34
RPS28P62857 AC079148.1-201ENST00000565944 819 ntBASIC0.46□□□□□ -2.34
RPS28P62857 MIR3660-201ENST00000584845 100 ntBASIC0.46□□□□□ -2.34
RPS28P62857 VN1R80P-201ENST00000597126 338 ntBASIC0.46□□□□□ -2.34
RPS28P62857 RNU6-87P-201ENST00000607561 108 ntBASIC0.46□□□□□ -2.34
RPS28P62857 MIR378J-201ENST00000611988 109 ntBASIC0.46□□□□□ -2.34
RPS28P62857 AC016911.1-201ENST00000613297 452 ntBASIC0.46□□□□□ -2.34
RPS28P62857 AC130324.3-201ENST00000614165 542 ntBASIC0.46□□□□□ -2.34
RPS28P62857 AC092140.2-201ENST00000618027 521 ntBASIC0.46□□□□□ -2.34
RPS28P62857 AC243829.7-201ENST00000633081 225 ntBASIC0.46□□□□□ -2.34
RPS28P62857 RNU5B-1-201ENST00000363286 116 ntBASIC0.45□□□□□ -2.34
RPS28P62857 SNORA5B-201ENST00000363786 132 ntBASIC0.45□□□□□ -2.34
RPS28P62857 RNU4-13P-201ENST00000364019 141 ntBASIC0.45□□□□□ -2.34
RPS28P62857 MIR605-201ENST00000385078 83 ntBASIC0.45□□□□□ -2.34
RPS28P62857 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
RPS28P62857 RSL24D1P4-201ENST00000400938 484 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.45□□□□□ -2.34
RPS28P62857 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.45□□□□□ -2.34
RPS28P62857 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.45□□□□□ -2.34
RPS28P62857 KRTAP19-11P-201ENST00000439851 104 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC005094.1-201ENST00000440420 368 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC025750.2-201ENST00000442609 450 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.45□□□□□ -2.34
RPS28P62857 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.45□□□□□ -2.34
RPS28P62857 FTH1P25-201ENST00000447665 469 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC009220.1-201ENST00000451614 275 ntBASIC0.45□□□□□ -2.34
RPS28P62857 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC0.45□□□□□ -2.34
RPS28P62857 RNU7-59P-201ENST00000459101 61 ntBASIC0.45□□□□□ -2.34
RPS28P62857 snoU13.27-201ENST00000459278 104 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC004223.1-201ENST00000479840 271 ntBASIC0.45□□□□□ -2.34
RPS28P62857 AC009646.1-201ENST00000510455 318 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms