Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RPL7P43-201ENST00000478876 753 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 RPL23AP49-201ENST00000492925 468 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 AC009646.1-201ENST00000510455 318 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.33□□□□□ -1.88
RHBDL3P58872 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.33□□□□□ -1.88
RHBDL3P58872 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.33□□□□□ -1.88
RHBDL3P58872 AC023824.2-201ENST00000566185 400 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.33□□□□□ -1.88
RHBDL3P58872 AP003400.5-201ENST00000624827 617 ntBASIC3.33□□□□□ -1.88
RHBDL3P58872 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.33□□□□□ -1.88
RHBDL3P58872 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.32□□□□□ -1.88
RHBDL3P58872 RNU6-82P-201ENST00000363970 107 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 RNU6-220P-201ENST00000390919 107 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 RNA5SP21-201ENST00000410917 96 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AL096701.2-201ENST00000416920 238 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AC074117.2-201ENST00000417130 397 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDL3P58872 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDL3P58872 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.32□□□□□ -1.88
RHBDL3P58872 RPS3AP44-201ENST00000425466 790 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AL591043.1-201ENST00000432461 424 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.32□□□□□ -1.88
RHBDL3P58872 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.32□□□□□ -1.88
RHBDL3P58872 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDL3P58872 RNA5SP401-201ENST00000515920 127 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RHBDL3P58872 CYCSP27-201ENST00000527643 293 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDL3P58872 AC023050.3-201ENST00000541142 333 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.32□□□□□ -1.88
RHBDL3P58872 AC136619.2-201ENST00000563361 631 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 HMGB1P33-201ENST00000563485 527 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 EIF1P4-201ENST00000572664 335 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AC012557.2-201ENST00000605919 418 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AC093788.1-201ENST00000609356 927 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 AC068792.1-201ENST00000621354 417 ntBASIC3.32□□□□□ -1.88
RHBDL3P58872 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
RHBDL3P58872 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.32□□□□□ -1.88
RHBDL3P58872 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RHBDL3P58872 RNA5SP126-201ENST00000365092 109 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 MIR181A1-201ENST00000385026 110 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 CALM2P3-201ENST00000400429 449 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 RNU6-1245P-201ENST00000411130 106 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 SEPT14P3-201ENST00000439401 183 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 AL732372.2-207ENST00000445840 183 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 SEPT14P2-201ENST00000453405 183 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.31□□□□□ -1.88
RHBDL3P58872 AC091435.1-201ENST00000505442 584 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 SEPT14P4-201ENST00000513445 186 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 Y_RNA.655-201ENST00000515919 96 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 RNU6-720P-201ENST00000516363 108 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 FO082796.1-201ENST00000523795 183 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 PSMA3P-201ENST00000555485 635 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 ZNF519P2-201ENST00000557032 169 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 AC073410.2-201ENST00000603240 332 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 AL121917.1-203ENST00000605534 577 ntBASIC3.31□□□□□ -1.88
RHBDL3P58872 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.31□□□□□ -1.88
RHBDL3P58872 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.31□□□□□ -1.88
RHBDL3P58872 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
RHBDL3P58872 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RHBDL3P58872 RNU6-527P-201ENST00000363425 104 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 RNU6-266P-201ENST00000364225 107 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 RNU6-301P-201ENST00000384277 107 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 MIR512-1-201ENST00000384913 84 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.3□□□□□ -1.88
RHBDL3P58872 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.3□□□□□ -1.88
RHBDL3P58872 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RHBDL3P58872 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDL3P58872 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDL3P58872 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDL3P58872 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDL3P58872 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDL3P58872 AIG1P1-201ENST00000503376 148 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AC019235.1-201ENST00000503847 207 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
RHBDL3P58872 RNU6-377P-201ENST00000515965 102 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 CKS1BP7-201ENST00000522230 235 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 MIR5571-201ENST00000577998 113 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.3□□□□□ -1.88
RHBDL3P58872 MIR4424-201ENST00000585257 86 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.3□□□□□ -1.88
RHBDL3P58872 AL162413.1-201ENST00000603198 110 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AC007792.1-201ENST00000623023 402 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 U4.7-201ENST00000638126 106 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AC068137.4-201ENST00000638485 296 ntBASIC3.3□□□□□ -1.88
RHBDL3P58872 AL021368.2-201ENST00000606125 5352 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RHBDL3P58872 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 SNORA38-201ENST00000363946 132 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 U3.12-201ENST00000364498 214 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 RNU6-1303P-201ENST00000364841 107 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 Y_RNA.381-201ENST00000365666 102 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 RPL21P3-201ENST00000395517 478 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AL133475.1-201ENST00000404414 305 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 RNU2-63P-201ENST00000410792 194 ntBASIC3.29□□□□□ -1.88
RHBDL3P58872 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.29□□□□□ -1.88
RHBDL3P58872 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.29□□□□□ -1.88
RHBDL3P58872 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.29□□□□□ -1.88
RHBDL3P58872 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms