Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR5004-201ENST00000579078 107 ntBASIC3.29□□□□□ -1.88
NEK3P51956 MIR5692C1-201ENST00000585309 91 ntBASIC3.29□□□□□ -1.88
NEK3P51956 AL357078.3-201ENST00000607528 618 ntBASIC3.29□□□□□ -1.88
NEK3P51956 AC068944.2-201ENST00000610373 403 ntBASIC3.29□□□□□ -1.88
NEK3P51956 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
NEK3P51956 MIR8057-201ENST00000620957 69 ntBASIC3.29□□□□□ -1.88
NEK3P51956 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.29□□□□□ -1.88
NEK3P51956 AC093831.2-201ENST00000624393 3427 ntBASIC3.29□□□□□ -1.88
NEK3P51956 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEK3P51956 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.29□□□□□ -1.88
NEK3P51956 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.29□□□□□ -1.88
NEK3P51956 SNORD114-19-201ENST00000363072 75 ntBASIC3.28□□□□□ -1.88
NEK3P51956 RNU6-105P-201ENST00000363909 104 ntBASIC3.28□□□□□ -1.88
NEK3P51956 RNU6-128P-201ENST00000383976 107 ntBASIC3.28□□□□□ -1.88
NEK3P51956 Y_RNA.615-201ENST00000410769 117 ntBASIC3.28□□□□□ -1.88
NEK3P51956 AL117339.3-201ENST00000418733 162 ntBASIC3.28□□□□□ -1.88
NEK3P51956 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.28□□□□□ -1.88
NEK3P51956 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.28□□□□□ -1.88
NEK3P51956 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.28□□□□□ -1.88
NEK3P51956 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.28□□□□□ -1.88
NEK3P51956 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.28□□□□□ -1.88
NEK3P51956 AL359672.1-201ENST00000442302 409 ntBASIC3.28□□□□□ -1.88
NEK3P51956 RPL36AP48-201ENST00000485521 314 ntBASIC3.28□□□□□ -1.88
NEK3P51956 MTCYBP18-201ENST00000501056 747 ntBASIC3.28□□□□□ -1.88
NEK3P51956 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.28□□□□□ -1.88
NEK3P51956 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.28□□□□□ -1.88
NEK3P51956 TBCAP3-201ENST00000512475 312 ntBASIC3.28□□□□□ -1.88
NEK3P51956 RNU6-358P-201ENST00000516564 75 ntBASIC3.28□□□□□ -1.88
NEK3P51956 RNU6-323P-201ENST00000521915 107 ntBASIC3.28□□□□□ -1.88
NEK3P51956 AF235103.2-201ENST00000525753 346 ntBASIC3.28□□□□□ -1.88
NEK3P51956 AP000763.2-201ENST00000540641 163 ntBASIC3.28□□□□□ -1.88
NEK3P51956 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.28□□□□□ -1.88
NEK3P51956 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.28□□□□□ -1.88
NEK3P51956 AC103810.1-201ENST00000579873 453 ntBASIC3.28□□□□□ -1.88
NEK3P51956 AC100830.2-201ENST00000581636 240 ntBASIC3.28□□□□□ -1.88
NEK3P51956 BNIP3P16-201ENST00000589779 534 ntBASIC3.28□□□□□ -1.88
NEK3P51956 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NEK3P51956 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
NEK3P51956 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.27□□□□□ -1.89
NEK3P51956 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEK3P51956 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEK3P51956 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEK3P51956 RNU6-527P-201ENST00000363425 104 ntBASIC3.27□□□□□ -1.89
NEK3P51956 Y_RNA.373-201ENST00000365600 103 ntBASIC3.27□□□□□ -1.89
NEK3P51956 RNU6-214P-201ENST00000384130 107 ntBASIC3.27□□□□□ -1.89
NEK3P51956 RPS29P13-201ENST00000402041 169 ntBASIC3.27□□□□□ -1.89
NEK3P51956 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.27□□□□□ -1.89
NEK3P51956 RNU6-1245P-201ENST00000411130 106 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC097463.2-201ENST00000421074 142 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.27□□□□□ -1.89
NEK3P51956 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
NEK3P51956 MTCO2P3-201ENST00000442543 421 ntBASIC3.27□□□□□ -1.89
NEK3P51956 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
NEK3P51956 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.27□□□□□ -1.89
NEK3P51956 RN7SL75P-201ENST00000461926 281 ntBASIC3.27□□□□□ -1.89
NEK3P51956 RPL31P58-201ENST00000469001 379 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.27□□□□□ -1.89
NEK3P51956 SCARNA3-201ENST00000517097 143 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.27□□□□□ -1.89
NEK3P51956 PSMA3P-201ENST00000555485 635 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC090897.2-201ENST00000581715 130 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC060780.3-201ENST00000589464 80 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.27□□□□□ -1.89
NEK3P51956 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.27□□□□□ -1.89
NEK3P51956 AL449363.1-201ENST00000617815 186 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC024581.2-201ENST00000619986 252 ntBASIC3.27□□□□□ -1.89
NEK3P51956 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.27□□□□□ -1.89
NEK3P51956 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NEK3P51956 AC008264.2-201ENST00000610193 3731 ntBASIC3.27□□□□□ -1.89
NEK3P51956 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
NEK3P51956 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.26□□□□□ -1.89
NEK3P51956 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NEK3P51956 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NEK3P51956 RNU6-525P-201ENST00000363685 104 ntBASIC3.26□□□□□ -1.89
NEK3P51956 RNU6-461P-201ENST00000364195 107 ntBASIC3.26□□□□□ -1.89
NEK3P51956 U6atac.2-201ENST00000408644 118 ntBASIC3.26□□□□□ -1.89
NEK3P51956 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
NEK3P51956 MTND1P2-201ENST00000430604 821 ntBASIC3.26□□□□□ -1.89
NEK3P51956 RPS15AP10-201ENST00000432472 382 ntBASIC3.26□□□□□ -1.89
NEK3P51956 NFU1P2-201ENST00000448700 469 ntBASIC3.26□□□□□ -1.89
NEK3P51956 AC080013.2-201ENST00000460866 323 ntBASIC3.26□□□□□ -1.89
NEK3P51956 AP001025.1-201ENST00000486139 332 ntBASIC3.26□□□□□ -1.89
NEK3P51956 AC083904.1-201ENST00000487828 231 ntBASIC3.26□□□□□ -1.89
NEK3P51956 AC097462.2-201ENST00000504623 481 ntBASIC3.26□□□□□ -1.89
NEK3P51956 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.26□□□□□ -1.89
NEK3P51956 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.26□□□□□ -1.89
NEK3P51956 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.26□□□□□ -1.89
NEK3P51956 AC105137.2-201ENST00000569073 466 ntBASIC3.26□□□□□ -1.89
NEK3P51956 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.26□□□□□ -1.89
NEK3P51956 AL121757.2-201ENST00000611223 313 ntBASIC3.26□□□□□ -1.89
NEK3P51956 AC091903.1-201ENST00000624322 454 ntBASIC3.26□□□□□ -1.89
NEK3P51956 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NEK3P51956 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.26□□□□□ -1.89
NEK3P51956 AC002543.1-201ENST00000299783 1954 ntBASIC3.25□□□□□ -1.89
NEK3P51956 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
NEK3P51956 RNU6-254P-201ENST00000363377 107 ntBASIC3.25□□□□□ -1.89
NEK3P51956 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEK3P51956 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEK3P51956 BX276092.3-201ENST00000424182 230 ntBASIC3.25□□□□□ -1.89
NEK3P51956 UBE2V1P4-201ENST00000425374 344 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms