Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.72□□□□□ -1.49
PRIM1P49642 AP004371.1-201ENST00000525240 214 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.72□□□□□ -1.49
PRIM1P49642 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.72□□□□□ -1.49
PRIM1P49642 DNAJC19P2-201ENST00000593340 302 ntBASIC5.72□□□□□ -1.49
PRIM1P49642 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.72□□□□□ -1.49
PRIM1P49642 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PRIM1P49642 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.72□□□□□ -1.49
PRIM1P49642 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
PRIM1P49642 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
PRIM1P49642 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PRIM1P49642 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRIM1P49642 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PRIM1P49642 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.71□□□□□ -1.5
PRIM1P49642 RNU6-899P-201ENST00000363947 107 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 MTND4LP9-201ENST00000427694 174 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 AC079780.1-201ENST00000428259 207 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 AC112220.1-201ENST00000434628 355 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 GPM6BP3-201ENST00000442797 145 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PRIM1P49642 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.71□□□□□ -1.5
PRIM1P49642 MTATP6P7-201ENST00000453315 681 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 AC021231.3-201ENST00000558497 370 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 RN7SL703P-201ENST00000578485 302 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 AL034408.1-202ENST00000636088 415 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.71□□□□□ -1.5
PRIM1P49642 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.71□□□□□ -1.5
PRIM1P49642 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PRIM1P49642 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.71□□□□□ -1.5
PRIM1P49642 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRIM1P49642 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRIM1P49642 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRIM1P49642 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRIM1P49642 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.7□□□□□ -1.5
PRIM1P49642 AC092268.1-201ENST00000342691 405 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 RNA5SP387-201ENST00000364226 106 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 RNU6-1141P-201ENST00000364520 107 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 Y_RNA.498-201ENST00000384460 102 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 RN7SKP61-201ENST00000410642 295 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PRIM1P49642 AC078809.1-201ENST00000427601 140 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.7□□□□□ -1.5
PRIM1P49642 RPS29P7-201ENST00000439662 171 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 Z82210.1-201ENST00000440037 231 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.7□□□□□ -1.5
PRIM1P49642 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.7□□□□□ -1.5
PRIM1P49642 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRIM1P49642 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.7□□□□□ -1.5
PRIM1P49642 RNU6-703P-201ENST00000516946 107 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 MED28P6-201ENST00000558776 231 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 MIR4458-201ENST00000578872 75 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.7□□□□□ -1.5
PRIM1P49642 AC090132.2-201ENST00000615881 347 ntBASIC5.7□□□□□ -1.5
PRIM1P49642 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.7□□□□□ -1.5
PRIM1P49642 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PRIM1P49642 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PRIM1P49642 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
PRIM1P49642 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PRIM1P49642 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.7□□□□□ -1.5
PRIM1P49642 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRIM1P49642 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRIM1P49642 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.69□□□□□ -1.5
PRIM1P49642 RNU1-83P-201ENST00000363426 164 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 RNU6-1056P-201ENST00000383996 107 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.69□□□□□ -1.5
PRIM1P49642 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.69□□□□□ -1.5
PRIM1P49642 AC146944.2-203ENST00000502493 354 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 UBE2CP3-201ENST00000502715 450 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 AC139495.1-202ENST00000513164 354 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 RNA5SP519-201ENST00000516480 119 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 RNU6-971P-201ENST00000516920 106 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 SNORA31.20-201ENST00000517111 133 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.69□□□□□ -1.5
PRIM1P49642 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.69□□□□□ -1.5
PRIM1P49642 AC018448.1-201ENST00000552843 316 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.69□□□□□ -1.5
PRIM1P49642 AL078604.3-201ENST00000615580 211 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 SNORA43.4-201ENST00000629559 138 ntBASIC5.69□□□□□ -1.5
PRIM1P49642 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.69□□□□□ -1.5
PRIM1P49642 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRIM1P49642 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.69□□□□□ -1.5
PRIM1P49642 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRIM1P49642 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PRIM1P49642 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.69□□□□□ -1.5
PRIM1P49642 AC073073.2-201ENST00000609827 2578 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.68□□□□□ -1.5
PRIM1P49642 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRIM1P49642 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRIM1P49642 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PRIM1P49642 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRIM1P49642 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.68□□□□□ -1.5
PRIM1P49642 Y_RNA.218-201ENST00000364218 104 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 SNORA11.1-201ENST00000408133 129 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 RNU2-52P-201ENST00000410680 190 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 IFNWP4-201ENST00000453148 294 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 RNA5SP497-201ENST00000516081 97 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.68□□□□□ -1.5
PRIM1P49642 AP002001.1-203ENST00000534002 267 ntBASIC5.68□□□□□ -1.5
PRIM1P49642 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms