Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RN7SL636P-201ENST00000497504 294 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.59□□□□□ -1.99
LHX1P48742 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX1P48742 RNU6-314P-201ENST00000516574 104 ntBASIC2.59□□□□□ -1.99
LHX1P48742 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 AL137161.1-201ENST00000532231 390 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 AL512310.1-201ENST00000548639 172 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AL512360.1-201ENST00000555346 234 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 LRRC37A5P-203ENST00000580181 585 ntBASIC2.59□□□□□ -1.99
LHX1P48742 BNIP3P30-201ENST00000601184 574 ntBASIC2.59□□□□□ -1.99
LHX1P48742 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX1P48742 RMST_4.1-201ENST00000616886 107 ntBASIC2.59□□□□□ -1.99
LHX1P48742 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.59□□□□□ -1.99
LHX1P48742 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -2
LHX1P48742 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -2
LHX1P48742 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
LHX1P48742 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.58□□□□□ -2
LHX1P48742 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.58□□□□□ -2
LHX1P48742 RNU6-748P-201ENST00000384648 107 ntBASIC2.58□□□□□ -2
LHX1P48742 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.58□□□□□ -2
LHX1P48742 SNORD37.1-201ENST00000390968 65 ntBASIC2.58□□□□□ -2
LHX1P48742 AL162578.1-201ENST00000406202 378 ntBASIC2.58□□□□□ -2
LHX1P48742 RPS4XP7-201ENST00000406274 780 ntBASIC2.58□□□□□ -2
LHX1P48742 AL606923.1-201ENST00000406616 190 ntBASIC2.58□□□□□ -2
LHX1P48742 FTH1P15-201ENST00000406984 280 ntBASIC2.58□□□□□ -2
LHX1P48742 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.58□□□□□ -2
LHX1P48742 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.58□□□□□ -2
LHX1P48742 MTND3P21-201ENST00000433774 331 ntBASIC2.58□□□□□ -2
LHX1P48742 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.58□□□□□ -2
LHX1P48742 HIGD1AP2-201ENST00000446367 280 ntBASIC2.58□□□□□ -2
LHX1P48742 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.58□□□□□ -2
LHX1P48742 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.58□□□□□ -2
LHX1P48742 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
LHX1P48742 MTAPP1-201ENST00000489154 819 ntBASIC2.58□□□□□ -2
LHX1P48742 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.58□□□□□ -2
LHX1P48742 AC019235.1-201ENST00000503847 207 ntBASIC2.58□□□□□ -2
LHX1P48742 AC234781.5-201ENST00000508429 271 ntBASIC2.58□□□□□ -2
LHX1P48742 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.58□□□□□ -2
LHX1P48742 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.58□□□□□ -2
LHX1P48742 Y_RNA.693-201ENST00000516641 110 ntBASIC2.58□□□□□ -2
LHX1P48742 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
LHX1P48742 AP004607.1-201ENST00000524456 203 ntBASIC2.58□□□□□ -2
LHX1P48742 AC027807.1-201ENST00000559921 996 ntBASIC2.58□□□□□ -2
LHX1P48742 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.58□□□□□ -2
LHX1P48742 AC103810.1-201ENST00000579873 453 ntBASIC2.58□□□□□ -2
LHX1P48742 OR1M4P-201ENST00000589199 287 ntBASIC2.58□□□□□ -2
LHX1P48742 AL031601.2-202ENST00000622650 282 ntBASIC2.58□□□□□ -2
LHX1P48742 SCARNA4-202ENST00000625402 129 ntBASIC2.58□□□□□ -2
LHX1P48742 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
LHX1P48742 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
LHX1P48742 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LHX1P48742 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
LHX1P48742 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
LHX1P48742 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LHX1P48742 RNU6-858P-201ENST00000362436 107 ntBASIC2.57□□□□□ -2
LHX1P48742 Y_RNA.372-201ENST00000365599 102 ntBASIC2.57□□□□□ -2
LHX1P48742 SNORA69-201ENST00000383895 132 ntBASIC2.57□□□□□ -2
LHX1P48742 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
LHX1P48742 SNORA16.2-201ENST00000390991 127 ntBASIC2.57□□□□□ -2
LHX1P48742 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.57□□□□□ -2
LHX1P48742 AL513475.1-201ENST00000406602 315 ntBASIC2.57□□□□□ -2
LHX1P48742 RAP1BP3-201ENST00000407180 549 ntBASIC2.57□□□□□ -2
LHX1P48742 RNU2-3P-201ENST00000410144 191 ntBASIC2.57□□□□□ -2
LHX1P48742 RNA5SP508-201ENST00000411327 119 ntBASIC2.57□□□□□ -2
LHX1P48742 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.57□□□□□ -2
LHX1P48742 RPS15AP7-201ENST00000439294 405 ntBASIC2.57□□□□□ -2
LHX1P48742 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.57□□□□□ -2
LHX1P48742 PRPS1P1-201ENST00000445305 876 ntBASIC2.57□□□□□ -2
LHX1P48742 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
LHX1P48742 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.57□□□□□ -2
LHX1P48742 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.57□□□□□ -2
LHX1P48742 RNU7-180P-201ENST00000459240 63 ntBASIC2.57□□□□□ -2
LHX1P48742 MRPL42P6-201ENST00000486397 371 ntBASIC2.57□□□□□ -2
LHX1P48742 SNORA31.6-201ENST00000516241 130 ntBASIC2.57□□□□□ -2
LHX1P48742 Y_RNA.687-201ENST00000516558 91 ntBASIC2.57□□□□□ -2
LHX1P48742 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.57□□□□□ -2
LHX1P48742 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.57□□□□□ -2
LHX1P48742 COX6CP5-201ENST00000527162 228 ntBASIC2.57□□□□□ -2
LHX1P48742 AC021269.2-201ENST00000532318 330 ntBASIC2.57□□□□□ -2
LHX1P48742 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.57□□□□□ -2
LHX1P48742 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.57□□□□□ -2
LHX1P48742 MIR5583-1-201ENST00000580941 59 ntBASIC2.57□□□□□ -2
LHX1P48742 AC019159.1-201ENST00000605094 187 ntBASIC2.57□□□□□ -2
LHX1P48742 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
LHX1P48742 AF250324.2-201ENST00000608299 610 ntBASIC2.57□□□□□ -2
LHX1P48742 AC092954.2-201ENST00000609103 430 ntBASIC2.57□□□□□ -2
LHX1P48742 AC093788.1-201ENST00000609356 927 ntBASIC2.57□□□□□ -2
LHX1P48742 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.57□□□□□ -2
LHX1P48742 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.57□□□□□ -2
LHX1P48742 uc_338.34-201ENST00000617467 174 ntBASIC2.57□□□□□ -2
LHX1P48742 AC010378.1-201ENST00000619270 362 ntBASIC2.57□□□□□ -2
LHX1P48742 AC022418.1-201ENST00000624118 445 ntBASIC2.57□□□□□ -2
LHX1P48742 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.57□□□□□ -2
LHX1P48742 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.57□□□□□ -2
LHX1P48742 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms