Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX3P48380 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.84□□□□□ -2.11
RFX3P48380 AC117522.1-201ENST00000509821 380 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.84□□□□□ -2.11
RFX3P48380 SNORA48.11-201ENST00000517015 89 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX3P48380 PSMA3P-201ENST00000555485 635 ntBASIC1.84□□□□□ -2.11
RFX3P48380 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
RFX3P48380 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.11
RFX3P48380 HMGN1P30-201ENST00000589286 268 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AC078899.2-201ENST00000595282 212 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AL031274.2-201ENST00000599419 203 ntBASIC1.84□□□□□ -2.11
RFX3P48380 WISP1-OT1-201ENST00000602893 642 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX3P48380 AL360219.1-201ENST00000610230 366 ntBASIC1.84□□□□□ -2.11
RFX3P48380 AC092656.1-203ENST00000624134 423 ntBASIC1.84□□□□□ -2.11
RFX3P48380 ZNF702P-202ENST00000434269 1966 ntBASIC1.84□□□□□ -2.11
RFX3P48380 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.84□□□□□ -2.12
RFX3P48380 CENPCP1-201ENST00000533085 2578 ntBASIC1.84□□□□□ -2.12
RFX3P48380 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
RFX3P48380 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RFX3P48380 AC002543.1-201ENST00000299783 1954 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.83□□□□□ -2.12
RFX3P48380 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RFX3P48380 RNU5E-1-201ENST00000362477 120 ntBASIC1.83□□□□□ -2.12
RFX3P48380 RNU6-553P-201ENST00000364047 96 ntBASIC1.83□□□□□ -2.12
RFX3P48380 U3.13-201ENST00000364804 214 ntBASIC1.83□□□□□ -2.12
RFX3P48380 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RFX3P48380 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RFX3P48380 RPS3AP36-201ENST00000398190 775 ntBASIC1.83□□□□□ -2.12
RFX3P48380 RNU4-26P-201ENST00000410270 107 ntBASIC1.83□□□□□ -2.12
RFX3P48380 Y_RNA.623-201ENST00000411128 95 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AL365338.1-201ENST00000422282 858 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AL365203.2-201ENST00000423444 196 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AL627311.1-201ENST00000431514 115 ntBASIC1.83□□□□□ -2.12
RFX3P48380 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX3P48380 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.83□□□□□ -2.12
RFX3P48380 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.83□□□□□ -2.12
RFX3P48380 TAF9P1-201ENST00000445421 515 ntBASIC1.83□□□□□ -2.12
RFX3P48380 RPL23AP3-201ENST00000453844 468 ntBASIC1.83□□□□□ -2.12
RFX3P48380 TAF9P2-201ENST00000454958 515 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AL583843.1-201ENST00000456070 346 ntBASIC1.83□□□□□ -2.12
RFX3P48380 PMCHL2-203ENST00000457791 237 ntBASIC1.83□□□□□ -2.12
RFX3P48380 MTAPP1-201ENST00000489154 819 ntBASIC1.83□□□□□ -2.12
RFX3P48380 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AC117522.2-201ENST00000510049 657 ntBASIC1.83□□□□□ -2.12
RFX3P48380 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX3P48380 AC136619.2-201ENST00000563361 631 ntBASIC1.83□□□□□ -2.12
RFX3P48380 DEFB122-202ENST00000569013 197 ntBASIC1.83□□□□□ -2.12
RFX3P48380 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
RFX3P48380 AL138889.2-201ENST00000603883 242 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AC012409.4-201ENST00000612923 249 ntBASIC1.83□□□□□ -2.12
RFX3P48380 U6.42-201ENST00000618440 107 ntBASIC1.83□□□□□ -2.12
RFX3P48380 AC091932.3-201ENST00000624223 323 ntBASIC1.83□□□□□ -2.12
RFX3P48380 HAUS6P2-201ENST00000433254 2404 ntBASIC1.82□□□□□ -2.12
RFX3P48380 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RFX3P48380 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RFX3P48380 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.82□□□□□ -2.12
RFX3P48380 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
RFX3P48380 RNU6-858P-201ENST00000362436 107 ntBASIC1.82□□□□□ -2.12
RFX3P48380 RNU6-39P-201ENST00000384344 107 ntBASIC1.82□□□□□ -2.12
RFX3P48380 Y_RNA.560-201ENST00000384689 102 ntBASIC1.82□□□□□ -2.12
RFX3P48380 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
RFX3P48380 RNU6-387P-201ENST00000411331 105 ntBASIC1.82□□□□□ -2.12
RFX3P48380 KATNBL1P6-201ENST00000453433 915 ntBASIC1.82□□□□□ -2.12
RFX3P48380 RNU7-125P-201ENST00000458760 62 ntBASIC1.82□□□□□ -2.12
RFX3P48380 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
RFX3P48380 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.82□□□□□ -2.12
RFX3P48380 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.82□□□□□ -2.12
RFX3P48380 AC108078.2-201ENST00000510750 236 ntBASIC1.82□□□□□ -2.12
RFX3P48380 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.82□□□□□ -2.12
RFX3P48380 AC034114.1-201ENST00000520293 285 ntBASIC1.82□□□□□ -2.12
RFX3P48380 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.82□□□□□ -2.12
RFX3P48380 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.82□□□□□ -2.12
RFX3P48380 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.82□□□□□ -2.12
RFX3P48380 AC092325.1-201ENST00000566449 554 ntBASIC1.82□□□□□ -2.12
RFX3P48380 MIR5089-201ENST00000580047 84 ntBASIC1.82□□□□□ -2.12
RFX3P48380 MIR3682-201ENST00000581338 84 ntBASIC1.82□□□□□ -2.12
RFX3P48380 MIR4524B-201ENST00000581569 115 ntBASIC1.82□□□□□ -2.12
RFX3P48380 AC009977.1-201ENST00000586015 570 ntBASIC1.82□□□□□ -2.12
RFX3P48380 RPL30P11-203ENST00000598995 310 ntBASIC1.82□□□□□ -2.12
RFX3P48380 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.82□□□□□ -2.12
RFX3P48380 MIR3529-201ENST00000637713 78 ntBASIC1.82□□□□□ -2.12
RFX3P48380 RBBP8P1-201ENST00000449447 1844 ntBASIC1.82□□□□□ -2.12
RFX3P48380 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RFX3P48380 SNORD114-19-201ENST00000363072 75 ntBASIC1.81□□□□□ -2.12
RFX3P48380 GSTA9P-201ENST00000406231 611 ntBASIC1.81□□□□□ -2.12
RFX3P48380 RNA5SP450-201ENST00000411206 102 ntBASIC1.81□□□□□ -2.12
RFX3P48380 AL445685.2-201ENST00000422551 342 ntBASIC1.81□□□□□ -2.12
RFX3P48380 AC007283.2-201ENST00000424739 197 ntBASIC1.81□□□□□ -2.12
RFX3P48380 AL445646.1-201ENST00000431784 216 ntBASIC1.81□□□□□ -2.12
RFX3P48380 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RFX3P48380 AL136380.1-201ENST00000447970 162 ntBASIC1.81□□□□□ -2.12
RFX3P48380 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RFX3P48380 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.81□□□□□ -2.12
RFX3P48380 MED28P2-201ENST00000475771 317 ntBASIC1.81□□□□□ -2.12
RFX3P48380 HMGB1P35-201ENST00000503360 598 ntBASIC1.81□□□□□ -2.12
RFX3P48380 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.81□□□□□ -2.12
RFX3P48380 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms