Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.49□□□□□ -2.01
NKX2-1P43699 AL138726.1-201ENST00000614873 333 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AC009233.1-201ENST00000616477 371 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 AL355365.1-201ENST00000616480 294 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.49□□□□□ -2.01
NKX2-1P43699 AC099654.5-201ENST00000636479 350 ntBASIC2.49□□□□□ -2.01
NKX2-1P43699 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.49□□□□□ -2.01
NKX2-1P43699 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NKX2-1P43699 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.48□□□□□ -2.01
NKX2-1P43699 Y_RNA.263-201ENST00000364659 114 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 RNU6-487P-201ENST00000365430 104 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NKX2-1P43699 RPL21P75-201ENST00000396599 483 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NKX2-1P43699 RPL21P28-201ENST00000401418 483 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC016831.2-201ENST00000417179 352 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 PDCL2P1-201ENST00000419302 352 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 RPL7P37-201ENST00000425095 738 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.48□□□□□ -2.01
NKX2-1P43699 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.48□□□□□ -2.01
NKX2-1P43699 AC005019.1-201ENST00000436455 431 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AL359672.1-201ENST00000442302 409 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.48□□□□□ -2.01
NKX2-1P43699 RPL21P39-201ENST00000463605 483 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC087884.1-201ENST00000469738 328 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC117503.1-201ENST00000472241 394 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC087190.1-201ENST00000484462 480 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC083904.1-201ENST00000487828 231 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC093591.1-201ENST00000491435 481 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 RPL21P129-201ENST00000491732 478 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 RPL21P16-201ENST00000495531 483 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC025465.4-201ENST00000513422 638 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.48□□□□□ -2.01
NKX2-1P43699 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.48□□□□□ -2.01
NKX2-1P43699 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.48□□□□□ -2.01
NKX2-1P43699 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.48□□□□□ -2.01
NKX2-1P43699 MIR4742-201ENST00000581069 85 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC005730.3-201ENST00000583067 366 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 MIR3672-201ENST00000584290 82 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC024153.1-201ENST00000603103 365 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AL670379.10-201ENST00000604330 253 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AL137843.1-201ENST00000605078 385 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 CTHRC1P1-201ENST00000605383 469 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AL670379.9-201ENST00000605428 253 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC002044.1-201ENST00000606707 158 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC138627.2-201ENST00000624202 601 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.48□□□□□ -2.01
NKX2-1P43699 MIR3529-201ENST00000637713 78 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 AC026241.1-201ENST00000517873 2142 ntBASIC2.48□□□□□ -2.01
NKX2-1P43699 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
NKX2-1P43699 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NKX2-1P43699 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.47□□□□□ -2.01
NKX2-1P43699 AL161431.1-201ENST00000618966 4205 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.47□□□□□ -2.01
NKX2-1P43699 AC138393.1-203ENST00000327086 343 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 RNU6-942P-201ENST00000363002 107 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 SNORD81.2-201ENST00000365153 76 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 MIR449B-201ENST00000384995 97 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 MIR147B-201ENST00000390185 80 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 MIR450B-201ENST00000401182 78 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 RPS4XP7-201ENST00000406274 780 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 VN1R36P-201ENST00000414936 291 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AL513477.1-202ENST00000417061 214 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.47□□□□□ -2.01
NKX2-1P43699 USP9YP8-201ENST00000441913 500 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 RPL32P28-201ENST00000443577 397 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 Z96811.1-201ENST00000445880 108 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.47□□□□□ -2.01
NKX2-1P43699 RNU4-49P-201ENST00000516080 140 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 RNU6-256P-201ENST00000516747 97 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AC007536.1-201ENST00000533382 349 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AC011611.1-201ENST00000552179 197 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AC009163.5-201ENST00000575421 637 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AC091135.1-201ENST00000585943 307 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AL627309.6-201ENST00000606857 840 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 AC107871.2-201ENST00000612894 502 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.47□□□□□ -2.01
NKX2-1P43699 AC010378.1-201ENST00000619270 362 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.47□□□□□ -2.01
NKX2-1P43699 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.47□□□□□ -2.01
NKX2-1P43699 MIR6733-201ENST00000635723 61 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 MIR7157-201ENST00000635801 60 ntBASIC2.47□□□□□ -2.01
NKX2-1P43699 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
NKX2-1P43699 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NKX2-1P43699 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
NKX2-1P43699 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
NKX2-1P43699 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NKX2-1P43699 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.46□□□□□ -2.02
NKX2-1P43699 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NKX2-1P43699 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.46□□□□□ -2.02
NKX2-1P43699 RPL9P7-201ENST00000330965 580 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 RNU6-1303P-201ENST00000364841 107 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 RNU5E-4P-201ENST00000364931 120 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 Y_RNA.339-201ENST00000365325 102 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 U8.9-201ENST00000365667 134 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 SNORD116-11-201ENST00000383882 92 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 SNORD15B-201ENST00000384714 146 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 MIR181B1-201ENST00000385240 110 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 RNU6-1009P-201ENST00000390996 107 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms