Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SCARNA4-201ENST00000629045 128 ntBASIC3.46□□□□□ -1.86
CD40P25942 SNORA43.4-201ENST00000629559 138 ntBASIC3.46□□□□□ -1.86
CD40P25942 AC008725.1-201ENST00000605123 2263 ntBASIC3.46□□□□□ -1.86
CD40P25942 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
CD40P25942 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CD40P25942 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CD40P25942 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CD40P25942 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.46□□□□□ -1.86
CD40P25942 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CD40P25942 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CD40P25942 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.45□□□□□ -1.86
CD40P25942 Y_RNA.149-201ENST00000363558 117 ntBASIC3.45□□□□□ -1.86
CD40P25942 RNU6-1141P-201ENST00000364520 107 ntBASIC3.45□□□□□ -1.86
CD40P25942 RNU6-487P-201ENST00000365430 104 ntBASIC3.45□□□□□ -1.86
CD40P25942 Y_RNA.358-201ENST00000365491 99 ntBASIC3.45□□□□□ -1.86
CD40P25942 RNU6-213P-201ENST00000384051 104 ntBASIC3.45□□□□□ -1.86
CD40P25942 SNORA29-201ENST00000384183 140 ntBASIC3.45□□□□□ -1.86
CD40P25942 MIR1251-201ENST00000408552 70 ntBASIC3.45□□□□□ -1.86
CD40P25942 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CD40P25942 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.45□□□□□ -1.86
CD40P25942 GPM6BP3-201ENST00000442797 145 ntBASIC3.45□□□□□ -1.86
CD40P25942 RPL39P29-201ENST00000447779 157 ntBASIC3.45□□□□□ -1.86
CD40P25942 AF186996.7-201ENST00000492781 209 ntBASIC3.45□□□□□ -1.86
CD40P25942 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.45□□□□□ -1.86
CD40P25942 AC110794.1-201ENST00000505816 425 ntBASIC3.45□□□□□ -1.86
CD40P25942 AC017037.1-201ENST00000508460 471 ntBASIC3.45□□□□□ -1.86
CD40P25942 RNU6-711P-201ENST00000517255 106 ntBASIC3.45□□□□□ -1.86
CD40P25942 RNA5SP179-201ENST00000517284 121 ntBASIC3.45□□□□□ -1.86
CD40P25942 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CD40P25942 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.45□□□□□ -1.86
CD40P25942 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.45□□□□□ -1.86
CD40P25942 AC069240.1-201ENST00000548774 375 ntBASIC3.45□□□□□ -1.86
CD40P25942 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.45□□□□□ -1.86
CD40P25942 AC034105.4-201ENST00000568304 277 ntBASIC3.45□□□□□ -1.86
CD40P25942 MIR5685-201ENST00000579080 79 ntBASIC3.45□□□□□ -1.86
CD40P25942 AC006130.2-201ENST00000586202 326 ntBASIC3.45□□□□□ -1.86
CD40P25942 AC091167.4-201ENST00000605079 184 ntBASIC3.45□□□□□ -1.86
CD40P25942 RPL23AP88-201ENST00000605759 454 ntBASIC3.45□□□□□ -1.86
CD40P25942 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.45□□□□□ -1.86
CD40P25942 AC008785.1-201ENST00000624475 456 ntBASIC3.45□□□□□ -1.86
CD40P25942 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.45□□□□□ -1.86
CD40P25942 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CD40P25942 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CD40P25942 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CD40P25942 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CD40P25942 AC066616.2-201ENST00000559334 1481 ntBASIC3.44□□□□□ -1.86
CD40P25942 Y_RNA.47-201ENST00000362697 108 ntBASIC3.44□□□□□ -1.86
CD40P25942 Y_RNA.380-201ENST00000365663 111 ntBASIC3.44□□□□□ -1.86
CD40P25942 RNU6-142P-201ENST00000384019 107 ntBASIC3.44□□□□□ -1.86
CD40P25942 SNORA51.11-201ENST00000384442 131 ntBASIC3.44□□□□□ -1.86
CD40P25942 RNU6-1222P-201ENST00000384615 107 ntBASIC3.44□□□□□ -1.86
CD40P25942 MIR554-201ENST00000384874 96 ntBASIC3.44□□□□□ -1.86
CD40P25942 MIR32-201ENST00000384965 70 ntBASIC3.44□□□□□ -1.86
CD40P25942 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CD40P25942 RNU6-750P-201ENST00000390946 107 ntBASIC3.44□□□□□ -1.86
CD40P25942 RNA5SP390-201ENST00000410191 113 ntBASIC3.44□□□□□ -1.86
CD40P25942 CYCSP19-201ENST00000411715 316 ntBASIC3.44□□□□□ -1.86
CD40P25942 AL160275.2-201ENST00000412010 394 ntBASIC3.44□□□□□ -1.86
CD40P25942 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.44□□□□□ -1.86
CD40P25942 AC114482.1-201ENST00000418010 247 ntBASIC3.44□□□□□ -1.86
CD40P25942 HLA-N-201ENST00000437516 135 ntBASIC3.44□□□□□ -1.86
CD40P25942 HMGN2P20-201ENST00000437531 273 ntBASIC3.44□□□□□ -1.86
CD40P25942 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.44□□□□□ -1.86
CD40P25942 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.44□□□□□ -1.86
CD40P25942 AC010655.3-201ENST00000478818 450 ntBASIC3.44□□□□□ -1.86
CD40P25942 RPS4XP22-201ENST00000480755 780 ntBASIC3.44□□□□□ -1.86
CD40P25942 AC016632.1-201ENST00000503994 196 ntBASIC3.44□□□□□ -1.86
CD40P25942 MRPS35P2-201ENST00000508242 191 ntBASIC3.44□□□□□ -1.86
CD40P25942 VWA8P1-201ENST00000510889 176 ntBASIC3.44□□□□□ -1.86
CD40P25942 AC006499.6-201ENST00000511169 607 ntBASIC3.44□□□□□ -1.86
CD40P25942 Y_RNA.715-201ENST00000517082 110 ntBASIC3.44□□□□□ -1.86
CD40P25942 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.44□□□□□ -1.86
CD40P25942 AC131281.1-201ENST00000522984 164 ntBASIC3.44□□□□□ -1.86
CD40P25942 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.44□□□□□ -1.86
CD40P25942 AC025281.1-201ENST00000567026 265 ntBASIC3.44□□□□□ -1.86
CD40P25942 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.44□□□□□ -1.86
CD40P25942 AL354798.1-201ENST00000622505 329 ntBASIC3.44□□□□□ -1.86
CD40P25942 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
CD40P25942 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.44□□□□□ -1.86
CD40P25942 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.44□□□□□ -1.86
CD40P25942 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CD40P25942 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
CD40P25942 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CD40P25942 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.43□□□□□ -1.86
CD40P25942 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CD40P25942 MTND5P1-201ENST00000445440 1375 ntBASIC3.43□□□□□ -1.86
CD40P25942 RNA5SP502-201ENST00000362694 119 ntBASIC3.43□□□□□ -1.86
CD40P25942 RNU6-238P-201ENST00000363313 106 ntBASIC3.43□□□□□ -1.86
CD40P25942 RNA5SP399-201ENST00000364003 117 ntBASIC3.43□□□□□ -1.86
CD40P25942 RNA5SP97-201ENST00000365006 84 ntBASIC3.43□□□□□ -1.86
CD40P25942 RNU6-748P-201ENST00000384648 107 ntBASIC3.43□□□□□ -1.86
CD40P25942 MIR147B-201ENST00000390185 80 ntBASIC3.43□□□□□ -1.86
CD40P25942 PTMAP5-201ENST00000393073 333 ntBASIC3.43□□□□□ -1.86
CD40P25942 MIR1252-201ENST00000408861 65 ntBASIC3.43□□□□□ -1.86
CD40P25942 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.43□□□□□ -1.86
CD40P25942 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.43□□□□□ -1.86
CD40P25942 AC087477.1-201ENST00000465747 340 ntBASIC3.43□□□□□ -1.86
CD40P25942 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.43□□□□□ -1.86
CD40P25942 AC093852.1-201ENST00000503587 266 ntBASIC3.43□□□□□ -1.86
CD40P25942 SLC25A15P5-201ENST00000508033 253 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms