Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RPS24P6-201ENST00000452670 400 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RNU7-167P-201ENST00000459160 62 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RPL9P32-201ENST00000464118 620 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 HMGB1P25-201ENST00000468402 607 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 SNORA70.19-201ENST00000516717 90 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR2AP24928 RNU6-323P-201ENST00000521915 107 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.51□□□□□ -1.85
POLR2AP24928 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
POLR2AP24928 MIR4524B-201ENST00000581569 115 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR2AP24928 MTND5P7-201ENST00000413558 1798 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR2AP24928 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR2AP24928 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR2AP24928 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.51□□□□□ -1.85
POLR2AP24928 MIR448-201ENST00000362131 111 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RNU6-562P-201ENST00000362731 107 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RNU6-1249P-201ENST00000363237 111 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RNU6-238P-201ENST00000363313 106 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RNU1-112P-201ENST00000364401 164 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
POLR2AP24928 AC243428.1-201ENST00000421099 264 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR2AP24928 AL645568.3-201ENST00000433683 316 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RPL23AP50-201ENST00000434149 455 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.51□□□□□ -1.85
POLR2AP24928 PCNPP5-201ENST00000452246 481 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 snoU13.3-201ENST00000459441 104 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 AC025465.3-201ENST00000510570 311 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
POLR2AP24928 IGKV2D-36-201ENST00000518643 226 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 RANP3-201ENST00000530970 276 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 MIR5696-201ENST00000578474 85 ntBASIC3.51□□□□□ -1.85
POLR2AP24928 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
POLR2AP24928 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
POLR2AP24928 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
POLR2AP24928 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.5□□□□□ -1.85
POLR2AP24928 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
POLR2AP24928 RNA5SP289-201ENST00000362332 137 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 Y_RNA.314-201ENST00000365114 102 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 RNA5SP104-201ENST00000410989 118 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 RNA5SP39-201ENST00000411245 120 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 AC007098.1-201ENST00000420122 367 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 AL160275.3-201ENST00000423876 471 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 AC010095.1-201ENST00000443543 144 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 GAPDHP27-201ENST00000447427 1020 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 RPL21P41-201ENST00000459863 264 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 SCGB1D5P-201ENST00000515134 247 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 RN7SKP82-201ENST00000516786 223 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
POLR2AP24928 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.5□□□□□ -1.85
POLR2AP24928 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.5□□□□□ -1.85
POLR2AP24928 MTND4LP5-201ENST00000605152 292 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 AL591516.1-201ENST00000611326 274 ntBASIC3.5□□□□□ -1.85
POLR2AP24928 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
POLR2AP24928 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.5□□□□□ -1.85
POLR2AP24928 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
POLR2AP24928 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
POLR2AP24928 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
POLR2AP24928 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
POLR2AP24928 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR2AP24928 RNU6-371P-201ENST00000364283 108 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 Y_RNA.396-201ENST00000383949 103 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 AL513331.1-201ENST00000411908 397 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR2AP24928 BX682237.1-201ENST00000415016 335 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 RPL7P37-201ENST00000425095 738 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 USMG5P1-201ENST00000425964 177 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR2AP24928 RPL21P2-201ENST00000440049 481 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 RNU6-408P-201ENST00000515910 100 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 RNU6-1095P-201ENST00000516148 108 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 AC040926.1-201ENST00000530195 238 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR2AP24928 HSBP1P1-201ENST00000555205 166 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 MIR4738-201ENST00000579134 87 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 AL670379.4-201ENST00000605279 254 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 PRR13P7-201ENST00000605538 430 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
POLR2AP24928 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR2AP24928 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR2AP24928 RNU6-263P-201ENST00000363811 107 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 AC019155.1-201ENST00000382242 574 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 SNORA70E-201ENST00000384492 135 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 RNU6-1222P-201ENST00000384615 107 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 RNU6-713P-201ENST00000384761 107 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 Y_RNA.574-201ENST00000384766 95 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 RNU2-23P-201ENST00000410545 195 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
POLR2AP24928 AC096644.2-201ENST00000429278 159 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
POLR2AP24928 MIR2053-201ENST00000459295 91 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 HMGB1P35-201ENST00000503360 598 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 RNU6-1143P-201ENST00000516125 104 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 Y_RNA.668-201ENST00000516233 93 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 Y_RNA.721-201ENST00000517207 102 ntBASIC3.49□□□□□ -1.85
POLR2AP24928 OR5D17P-201ENST00000531492 978 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms