Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC068135.2-201ENST00000569293 1028 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AL078603.1-201ENST00000603824 313 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 BCRP9-201ENST00000605312 388 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC097468.3-201ENST00000607956 456 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC004908.2-201ENST00000609090 574 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC108747.1-201ENST00000609508 535 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC013476.2-201ENST00000614456 459 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 U6atac.1-201ENST00000616025 117 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC068880.5-201ENST00000624331 290 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AL157786.1-207ENST00000627771 695 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 SEPT14P19-203ENST00000633205 211 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.61□□□□□ -2.15
COL5A1P20908 RNU6-223P-201ENST00000362830 107 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 RNU6-97P-201ENST00000363387 104 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 MIR19A-201ENST00000384878 82 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
COL5A1P20908 AL591034.1-201ENST00000407447 340 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.61□□□□□ -2.15
COL5A1P20908 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC000111.3-201ENST00000433478 193 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC002486.1-201ENST00000435098 391 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 MTATP6P13-201ENST00000438531 667 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 Z96811.1-201ENST00000445880 108 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC234775.1-201ENST00000454247 670 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 SNORD97-201ENST00000459187 142 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC105914.1-201ENST00000511798 226 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC105417.1-201ENST00000514691 285 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 RNA5SP364-201ENST00000516938 78 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 MTND4LP26-201ENST00000518144 282 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.61□□□□□ -2.15
COL5A1P20908 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.61□□□□□ -2.15
COL5A1P20908 AC087883.1-201ENST00000551882 391 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.61□□□□□ -2.15
COL5A1P20908 SETP7-201ENST00000552169 453 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 TPRKBP2-201ENST00000565969 475 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AP001094.1-201ENST00000579805 193 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 MIR3935-201ENST00000583472 104 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC011451.2-201ENST00000604303 598 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 AC007038.2-201ENST00000608095 740 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 RMST_6.1-201ENST00000611980 203 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 uc_338.11-201ENST00000619132 160 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 MIR4275-201ENST00000636486 87 ntBASIC1.61□□□□□ -2.15
COL5A1P20908 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
COL5A1P20908 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL5A1P20908 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL5A1P20908 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COL5A1P20908 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL5A1P20908 Y_RNA.1-201ENST00000352915 104 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 MIR96-201ENST00000362288 78 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 Y_RNA.481-201ENST00000384373 102 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL5A1P20908 FO393413.1-201ENST00000402892 195 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.6□□□□□ -2.15
COL5A1P20908 EIF1P1-201ENST00000421436 341 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 MTCYBP5-201ENST00000423752 1135 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 MTCO2P19-201ENST00000427513 598 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC073464.1-201ENST00000429823 534 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 GPR143P-201ENST00000434155 205 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.6□□□□□ -2.15
COL5A1P20908 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 BNIP3P2-201ENST00000441221 577 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 RAC1P7-201ENST00000445367 377 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 TPT1P14-201ENST00000448018 505 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 AC096751.1-202ENST00000502691 1067 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 AC010587.1-201ENST00000505809 469 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 RNU6-1095P-201ENST00000516148 108 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.6□□□□□ -2.15
COL5A1P20908 SNRPGP16-201ENST00000533275 226 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 AC011604.1-201ENST00000545978 196 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.6□□□□□ -2.15
COL5A1P20908 DUXAP4-201ENST00000603046 613 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AL162413.1-201ENST00000603198 110 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC008962.1-201ENST00000605729 304 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC008536.2-201ENST00000607284 349 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC090970.3-201ENST00000612566 866 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC093838.1-201ENST00000613014 469 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 DUXAP9-208ENST00000622815 614 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.6□□□□□ -2.15
COL5A1P20908 AC019226.1-201ENST00000625666 515 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
COL5A1P20908 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COL5A1P20908 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL5A1P20908 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
COL5A1P20908 RNU4-13P-201ENST00000364019 141 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 RNU6-533P-201ENST00000384144 107 ntBASIC1.59□□□□□ -2.15
COL5A1P20908 MIR558-201ENST00000384920 94 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms