Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC093648.1-201ENST00000623546 606 ntBASIC0.43□□□□□ -2.34
HIST1H1DP16402 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HIST1H1DP16402 RNU6-359P-201ENST00000365466 108 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H1DP16402 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
HIST1H1DP16402 TAF13P2-201ENST00000416876 286 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 SNX2P2-201ENST00000424553 323 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 CBX3P6-201ENST00000430257 527 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 AL096829.2-201ENST00000446582 742 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 AC020550.1-201ENST00000447385 163 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H1DP16402 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H1DP16402 AC110760.3-202ENST00000515177 371 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H1DP16402 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.42□□□□□ -2.34
HIST1H1DP16402 AC109446.2-201ENST00000567872 497 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H1DP16402 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
HIST1H1DP16402 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 AC009268.2-201ENST00000621925 457 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 AC022513.1-201ENST00000624512 117 ntBASIC0.42□□□□□ -2.34
HIST1H1DP16402 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HIST1H1DP16402 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
HIST1H1DP16402 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HIST1H1DP16402 MIR96-201ENST00000362288 78 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 RNU6-17P-201ENST00000384245 107 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 RNU6-18P-201ENST00000384527 107 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 MIR520E-201ENST00000384867 87 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 MIR186-201ENST00000384988 86 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AL590084.2-201ENST00000401481 382 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 Y_RNA.595-201ENST00000410403 105 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC083875.1-201ENST00000419509 405 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H1DP16402 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H1DP16402 GTF2IP13-201ENST00000438487 386 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 USP9YP22-201ENST00000438971 294 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC005840.1-201ENST00000498412 377 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 PDCD5P2-201ENST00000507570 312 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC108078.2-201ENST00000510750 236 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AF131216.2-201ENST00000512316 564 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 TRMT112P2-201ENST00000512910 132 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 RNA5SP384-201ENST00000516615 116 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H1DP16402 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H1DP16402 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.41□□□□□ -2.34
HIST1H1DP16402 BNIP3P10-201ENST00000605360 577 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC105129.3-201ENST00000605455 485 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 TUG1_2.1-201ENST00000614234 87 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC130454.1-201ENST00000622948 401 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 AC106730.3-201ENST00000624568 641 ntBASIC0.41□□□□□ -2.34
HIST1H1DP16402 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.4□□□□□ -2.34
HIST1H1DP16402 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
HIST1H1DP16402 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 SNORD114-24-201ENST00000365029 72 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 HSPE1P9-201ENST00000440046 311 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 KATNBL1P3-201ENST00000443475 909 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HIST1H1DP16402 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 EIF1AXP2-201ENST00000555940 413 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 CYP3A137P-201ENST00000562436 69 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1DP16402 AC112220.2-201ENST00000605513 533 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 AC019226.1-201ENST00000625666 515 ntBASIC0.4□□□□□ -2.35
HIST1H1DP16402 RNU6-944P-201ENST00000364023 107 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 Y_RNA.234-201ENST00000364409 97 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 SUGT1P1-201ENST00000379514 476 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 MIR605-201ENST00000385078 83 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 AC114482.1-201ENST00000418010 247 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 MTCO2P5-201ENST00000422621 426 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.39□□□□□ -2.35
HIST1H1DP16402 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.39□□□□□ -2.35
HIST1H1DP16402 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1DP16402 GTF2IP3-201ENST00000433887 494 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 TIMM9P1-201ENST00000436122 256 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1DP16402 BRK1P2-201ENST00000442875 223 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1DP16402 AC130509.1-201ENST00000464158 433 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 RNA5SP102-201ENST00000516865 106 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 AC090142.3-201ENST00000519012 385 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 AC022861.1-201ENST00000522981 663 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 CYP4A27P-201ENST00000567218 190 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 MIR3664-201ENST00000579074 99 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 AL390208.1-201ENST00000605885 644 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
HIST1H1DP16402 AL590240.4-201ENST00000616908 390 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms