Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PDGFRAP16234 HAUS6P2-201ENST00000433254 2404 ntBASIC2.53□□□□□ -2
PDGFRAP16234 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.53□□□□□ -2
PDGFRAP16234 ZNF680P1-201ENST00000436625 1469 ntBASIC2.53□□□□□ -2
PDGFRAP16234 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
PDGFRAP16234 RNU6-858P-201ENST00000362436 107 ntBASIC2.53□□□□□ -2
PDGFRAP16234 SNORA25.6-201ENST00000364121 118 ntBASIC2.53□□□□□ -2
PDGFRAP16234 U8.8-201ENST00000365399 135 ntBASIC2.53□□□□□ -2
PDGFRAP16234 RNU5A-6P-201ENST00000384136 116 ntBASIC2.53□□□□□ -2
PDGFRAP16234 RNU6-843P-201ENST00000384454 104 ntBASIC2.53□□□□□ -2
PDGFRAP16234 RNU6-45P-201ENST00000384471 107 ntBASIC2.53□□□□□ -2
PDGFRAP16234 Y_RNA.582-201ENST00000391023 95 ntBASIC2.53□□□□□ -2
PDGFRAP16234 GSTA9P-201ENST00000406231 611 ntBASIC2.53□□□□□ -2
PDGFRAP16234 RAP1BP3-201ENST00000407180 549 ntBASIC2.53□□□□□ -2
PDGFRAP16234 RNU2-3P-201ENST00000410144 191 ntBASIC2.53□□□□□ -2
PDGFRAP16234 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
PDGFRAP16234 RPS3AP44-201ENST00000425466 790 ntBASIC2.53□□□□□ -2
PDGFRAP16234 MTND1P29-201ENST00000448112 647 ntBASIC2.53□□□□□ -2
PDGFRAP16234 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.53□□□□□ -2
PDGFRAP16234 AL356010.1-201ENST00000456364 102 ntBASIC2.53□□□□□ -2
PDGFRAP16234 AC006512.1-201ENST00000468816 291 ntBASIC2.53□□□□□ -2
PDGFRAP16234 AC093534.1-201ENST00000504977 132 ntBASIC2.53□□□□□ -2
PDGFRAP16234 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.53□□□□□ -2
PDGFRAP16234 Y_RNA.687-201ENST00000516558 91 ntBASIC2.53□□□□□ -2
PDGFRAP16234 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.53□□□□□ -2
PDGFRAP16234 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.53□□□□□ -2
PDGFRAP16234 LRRC37A5P-203ENST00000580181 585 ntBASIC2.53□□□□□ -2
PDGFRAP16234 MIR3611-201ENST00000584484 83 ntBASIC2.53□□□□□ -2
PDGFRAP16234 AC096772.1-201ENST00000609146 564 ntBASIC2.53□□□□□ -2
PDGFRAP16234 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.53□□□□□ -2
PDGFRAP16234 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.53□□□□□ -2
PDGFRAP16234 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
PDGFRAP16234 AL139276.1-201ENST00000311910 1001 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 Y_RNA.51-201ENST00000362725 102 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 RNU6-715P-201ENST00000365204 103 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PDGFRAP16234 AL133475.1-201ENST00000404414 305 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.52□□□□□ -2.01
PDGFRAP16234 RNU2-9P-201ENST00000410194 145 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFRAP16234 AL139413.1-201ENST00000421309 217 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 PGBD4P6-201ENST00000421501 610 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AL669831.1-202ENST00000428504 417 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AC073464.1-201ENST00000429823 534 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 GTF2IP13-201ENST00000438487 386 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFRAP16234 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.52□□□□□ -2.01
PDGFRAP16234 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFRAP16234 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFRAP16234 AL118520.1-201ENST00000450770 291 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AC006026.2-201ENST00000457376 180 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 TPT1P7-201ENST00000458300 517 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AC112771.1-201ENST00000463581 102 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 RPS3AP17-201ENST00000472594 777 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 HMGB1P29-201ENST00000505659 499 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AC092436.1-201ENST00000506450 503 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AC091133.4-201ENST00000511142 308 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 AC074344.1-201ENST00000512823 224 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 LRRC34P2-201ENST00000514850 553 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PDGFRAP16234 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFRAP16234 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
PDGFRAP16234 RPS15AP11-201ENST00000594193 385 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 CTSLP2-204ENST00000629029 392 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PDGFRAP16234 AC006020.1-201ENST00000420179 1854 ntBASIC2.52□□□□□ -2.01
PDGFRAP16234 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PDGFRAP16234 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFRAP16234 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFRAP16234 OR4G2P-201ENST00000328113 903 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 RNA5SP289-201ENST00000362332 137 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 RNU6-487P-201ENST00000365430 104 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 SNORA67.4-201ENST00000384688 142 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PDGFRAP16234 BTF3P7-201ENST00000407097 488 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 RNU2-29P-201ENST00000410423 189 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 CYCSP33-201ENST00000414485 327 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AC003685.2-201ENST00000422795 395 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFRAP16234 TOMM20P4-201ENST00000427861 435 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.51□□□□□ -2.01
PDGFRAP16234 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDGFRAP16234 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AC117522.2-201ENST00000510049 657 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 RNU6-1178P-201ENST00000516674 107 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.51□□□□□ -2.01
PDGFRAP16234 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
PDGFRAP16234 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.51□□□□□ -2.01
PDGFRAP16234 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms