Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 RNU6-655P-201ENST00000362858 107 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 SNORD35B-201ENST00000363660 87 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 RNU6-1210P-201ENST00000363775 107 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PF4V1P10720 RNU6-1286P-201ENST00000383871 107 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 SNORA26.3-201ENST00000391119 136 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 RNU6ATAC-201ENST00000408749 126 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 Y_RNA.646-201ENST00000410980 101 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
PF4V1P10720 AL513477.1-202ENST00000417061 214 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.24□□□□□ -1.89
PF4V1P10720 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.24□□□□□ -1.89
PF4V1P10720 AL513124.1-201ENST00000450410 614 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC079354.2-201ENST00000453523 154 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 RPL30P15-201ENST00000457129 321 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.24□□□□□ -1.89
PF4V1P10720 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.24□□□□□ -1.89
PF4V1P10720 RPL30P1-201ENST00000488676 339 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC096576.1-201ENST00000489014 359 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC091874.1-201ENST00000511402 339 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 RNU6-1213P-201ENST00000517075 94 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 COX6CP5-201ENST00000527162 228 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.24□□□□□ -1.89
PF4V1P10720 AC021231.3-201ENST00000558497 370 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.24□□□□□ -1.89
PF4V1P10720 AC006130.2-201ENST00000586202 326 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AL133255.1-201ENST00000606374 441 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AL050343.2-201ENST00000607338 280 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC069234.5-201ENST00000611056 416 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 AC103858.2-201ENST00000621471 543 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PF4V1P10720 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PF4V1P10720 AC073544.1-201ENST00000600110 1595 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 MAPK10-373ENST00000641983 6772 ntBASIC3.24□□□□□ -1.89
PF4V1P10720 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PF4V1P10720 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.23□□□□□ -1.89
PF4V1P10720 Y_RNA.40-201ENST00000362645 93 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 U3.13-201ENST00000364804 214 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 RNU6-968P-201ENST00000384076 107 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 Y_RNA.504-201ENST00000384481 104 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 MIR93-201ENST00000385024 80 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 SNORA75.6-201ENST00000391318 127 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 U6atac.2-201ENST00000408644 118 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 RNU6-1304P-201ENST00000411374 106 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.23□□□□□ -1.89
PF4V1P10720 AF228730.4-201ENST00000421457 183 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 EIF4EP4-201ENST00000424916 578 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC002075.2-201ENST00000425207 252 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AIMP1P2-201ENST00000425294 312 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 RPS15AP7-201ENST00000439294 405 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 RPS29P7-201ENST00000439662 171 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC006011.1-201ENST00000442758 349 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 GPM6BP3-201ENST00000442797 145 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.23□□□□□ -1.89
PF4V1P10720 FO393415.2-201ENST00000480085 343 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AIG1P1-201ENST00000503376 148 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 HMGN1P13-201ENST00000505795 138 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC005741.1-201ENST00000511094 432 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 SNORA25.11-201ENST00000515935 105 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC093331.1-201ENST00000521474 169 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.23□□□□□ -1.89
PF4V1P10720 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
PF4V1P10720 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.23□□□□□ -1.89
PF4V1P10720 FAM35CP-201ENST00000554755 2470 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.23□□□□□ -1.89
PF4V1P10720 CYP4A43P-201ENST00000568156 121 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AC120057.2-201ENST00000571520 271 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 MIR3616-201ENST00000584070 92 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 BNIP3P22-201ENST00000593399 556 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 RNU1-30P-201ENST00000606575 163 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AL627309.6-201ENST00000606857 840 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AL359198.2-201ENST00000611836 194 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 HMGB1P24-202ENST00000615653 685 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.23□□□□□ -1.89
PF4V1P10720 SNORA43.4-201ENST00000629559 138 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 AL732372.2-225ENST00000642124 456 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PF4V1P10720 ZNF299P-201ENST00000406845 1804 ntBASIC3.23□□□□□ -1.89
PF4V1P10720 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PF4V1P10720 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
PF4V1P10720 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.23□□□□□ -1.89
PF4V1P10720 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PF4V1P10720 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
PF4V1P10720 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
PF4V1P10720 MTND5P10-201ENST00000603719 1809 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 Y_RNA.187-201ENST00000363918 113 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 SNORA41-201ENST00000384675 132 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 CYCSP19-201ENST00000411715 316 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.22□□□□□ -1.89
PF4V1P10720 RPL31P12-201ENST00000422587 358 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AL691449.1-201ENST00000426570 421 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.22□□□□□ -1.89
PF4V1P10720 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.22□□□□□ -1.89
PF4V1P10720 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.22□□□□□ -1.89
PF4V1P10720 CYCSP35-201ENST00000451978 304 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 RNA5SP246-201ENST00000458909 119 ntBASIC3.22□□□□□ -1.89
PF4V1P10720 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.22□□□□□ -1.89
PF4V1P10720 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms