Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR3690-201ENST00000580266 75 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 U3.45-201ENST00000607547 219 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 MTND5P9-201ENST00000503854 1755 ntBASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CSB-PGBD3P0DP91 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 RNY1P5-201ENST00000383890 115 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-166P-201ENST00000384371 107 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 MIR521-1-201ENST00000384902 87 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 SNORD56-201ENST00000413522 71 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AC017079.2-201ENST00000416102 485 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AL591419.1-201ENST00000427423 339 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 NDUFB4P6-201ENST00000436819 366 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AL078601.1-201ENST00000444542 271 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-1037P-201ENST00000459571 107 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 RPL30P5-201ENST00000494923 336 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 SCARNA13-201ENST00000516672 275 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 RN7SKP289-201ENST00000517244 295 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 MTND5P41-201ENST00000517498 206 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AL442163.3-201ENST00000554110 156 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AC018529.3-201ENST00000624212 2254 ntBASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CSB-PGBD3P0DP91 AC073346.2-201ENST00000624724 2058 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AC010733.2-201ENST00000589496 5702 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 RPL9P7-201ENST00000330965 580 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-858P-201ENST00000362436 107 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 RNA5SP72-201ENST00000364442 117 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-102P-201ENST00000384485 104 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 MIR183-201ENST00000384958 110 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 MIR34A-201ENST00000385130 110 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 Y_RNA.602-201ENST00000410535 92 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AL139247.1-201ENST00000422768 325 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AC092047.1-201ENST00000424997 240 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AL513043.1-201ENST00000439124 535 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 NDUFB4P10-201ENST00000452541 359 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AC092798.1-201ENST00000458542 409 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 RPL21P11-201ENST00000461458 483 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 RPL9P9-202ENST00000466501 579 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 RNU7-200P-201ENST00000516105 62 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 SCARNA14-201ENST00000516903 136 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 MIR7702-201ENST00000621931 59 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 U6.105-201ENST00000637379 88 ntBASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CSB-PGBD3P0DP91 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-140P-201ENST00000384566 108 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AL356535.1-201ENST00000440335 398 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AL133162.1-201ENST00000463228 453 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AL591473.1-201ENST00000464297 313 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 RPL23AP45-201ENST00000476406 468 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 MRPS36P4-201ENST00000534436 298 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AC010186.2-204ENST00000537668 439 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 MIR3922-201ENST00000585192 84 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AC073657.2-201ENST00000605661 303 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AC140113.4-201ENST00000622087 222 ntBASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CSB-PGBD3P0DP91 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RNU1-15P-201ENST00000353977 144 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 Y_RNA.81-201ENST00000362997 102 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 Y_RNA.358-201ENST00000365491 99 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RNU6-81P-201ENST00000365608 104 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 U1.1-201ENST00000384101 164 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RPL21P75-201ENST00000396599 483 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 RPL21P28-201ENST00000401418 483 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 Y_RNA.626-201ENST00000411288 95 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AL590556.1-201ENST00000423231 483 ntBASIC5.22□□□□□ -1.57
CSB-PGBD3P0DP91 AC098614.2-201ENST00000426040 255 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms