Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 Y_RNA.214-201ENST00000364201 112 ntBASIC4.7□□□□□ -1.66
NEFMP07197 RNU6-1062P-201ENST00000383908 107 ntBASIC4.7□□□□□ -1.66
NEFMP07197 Y_RNA.483-201ENST00000384380 101 ntBASIC4.7□□□□□ -1.66
NEFMP07197 Y_RNA.562-201ENST00000384695 113 ntBASIC4.7□□□□□ -1.66
NEFMP07197 EI24P2-201ENST00000397776 1076 ntBASIC4.7□□□□□ -1.66
NEFMP07197 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEFMP07197 SSXP9-201ENST00000417503 292 ntBASIC4.7□□□□□ -1.66
NEFMP07197 YME1L1P1-201ENST00000429435 297 ntBASIC4.7□□□□□ -1.66
NEFMP07197 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.7□□□□□ -1.66
NEFMP07197 AL360271.2-201ENST00000447710 161 ntBASIC4.7□□□□□ -1.66
NEFMP07197 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.7□□□□□ -1.66
NEFMP07197 snoU13.3-201ENST00000459441 104 ntBASIC4.7□□□□□ -1.66
NEFMP07197 SNORA70.18-201ENST00000516696 98 ntBASIC4.7□□□□□ -1.66
NEFMP07197 RNU6-914P-201ENST00000516749 109 ntBASIC4.7□□□□□ -1.66
NEFMP07197 AC144568.1-201ENST00000520139 137 ntBASIC4.7□□□□□ -1.66
NEFMP07197 NDUFB9P3-201ENST00000521269 501 ntBASIC4.7□□□□□ -1.66
NEFMP07197 SNRPGP16-201ENST00000533275 226 ntBASIC4.7□□□□□ -1.66
NEFMP07197 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.7□□□□□ -1.66
NEFMP07197 MIR4425-201ENST00000580572 84 ntBASIC4.7□□□□□ -1.66
NEFMP07197 AC084757.4-201ENST00000616350 526 ntBASIC4.7□□□□□ -1.66
NEFMP07197 AC007656.2-201ENST00000624902 4547 ntBASIC4.7□□□□□ -1.66
NEFMP07197 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEFMP07197 AC073073.2-201ENST00000609827 2578 ntBASIC4.7□□□□□ -1.66
NEFMP07197 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEFMP07197 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NEFMP07197 RNU6-600P-201ENST00000362524 99 ntBASIC4.69□□□□□ -1.66
NEFMP07197 RNA5SP50-201ENST00000363731 107 ntBASIC4.69□□□□□ -1.66
NEFMP07197 Y_RNA.222-201ENST00000364264 102 ntBASIC4.69□□□□□ -1.66
NEFMP07197 Y_RNA.376-201ENST00000365638 108 ntBASIC4.69□□□□□ -1.66
NEFMP07197 Y_RNA.478-201ENST00000384358 107 ntBASIC4.69□□□□□ -1.66
NEFMP07197 RNU6-933P-201ENST00000384424 107 ntBASIC4.69□□□□□ -1.66
NEFMP07197 SNORD73A-201ENST00000386062 65 ntBASIC4.69□□□□□ -1.66
NEFMP07197 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NEFMP07197 U3.39-201ENST00000408569 239 ntBASIC4.69□□□□□ -1.66
NEFMP07197 RNU6-712P-201ENST00000410558 100 ntBASIC4.69□□□□□ -1.66
NEFMP07197 RNU2-38P-201ENST00000410856 79 ntBASIC4.69□□□□□ -1.66
NEFMP07197 RNU6-607P-201ENST00000411283 108 ntBASIC4.69□□□□□ -1.66
NEFMP07197 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.69□□□□□ -1.66
NEFMP07197 AC244098.2-201ENST00000422068 99 ntBASIC4.69□□□□□ -1.66
NEFMP07197 ELOCP20-201ENST00000422460 345 ntBASIC4.69□□□□□ -1.66
NEFMP07197 UBE2D3P2-201ENST00000424409 445 ntBASIC4.69□□□□□ -1.66
NEFMP07197 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.69□□□□□ -1.66
NEFMP07197 FCF1P4-201ENST00000448326 183 ntBASIC4.69□□□□□ -1.66
NEFMP07197 CYCSP35-201ENST00000451978 304 ntBASIC4.69□□□□□ -1.66
NEFMP07197 MTND3P25-201ENST00000509243 135 ntBASIC4.69□□□□□ -1.66
NEFMP07197 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.69□□□□□ -1.66
NEFMP07197 CBX3P8-201ENST00000532412 525 ntBASIC4.69□□□□□ -1.66
NEFMP07197 RAC1P9-201ENST00000604990 392 ntBASIC4.69□□□□□ -1.66
NEFMP07197 AC098479.1-201ENST00000609225 154 ntBASIC4.69□□□□□ -1.66
NEFMP07197 U4.6-201ENST00000621618 127 ntBASIC4.69□□□□□ -1.66
NEFMP07197 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEFMP07197 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEFMP07197 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NEFMP07197 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.69□□□□□ -1.66
NEFMP07197 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEFMP07197 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NEFMP07197 RNU6-1249P-201ENST00000363237 111 ntBASIC4.68□□□□□ -1.66
NEFMP07197 SNORA7.2-201ENST00000364446 145 ntBASIC4.68□□□□□ -1.66
NEFMP07197 Y_RNA.518-201ENST00000384552 113 ntBASIC4.68□□□□□ -1.66
NEFMP07197 MIR578-201ENST00000384828 96 ntBASIC4.68□□□□□ -1.66
NEFMP07197 RNU6-837P-201ENST00000391056 108 ntBASIC4.68□□□□□ -1.66
NEFMP07197 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.68□□□□□ -1.66
NEFMP07197 Y_RNA.687-201ENST00000516558 91 ntBASIC4.68□□□□□ -1.66
NEFMP07197 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.68□□□□□ -1.66
NEFMP07197 AC008489.1-201ENST00000524271 483 ntBASIC4.68□□□□□ -1.66
NEFMP07197 SYF2P1-201ENST00000550658 413 ntBASIC4.68□□□□□ -1.66
NEFMP07197 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.68□□□□□ -1.66
NEFMP07197 AC096772.1-201ENST00000609146 564 ntBASIC4.68□□□□□ -1.66
NEFMP07197 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.68□□□□□ -1.66
NEFMP07197 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NEFMP07197 ZNF72P-201ENST00000425869 1908 ntBASIC4.68□□□□□ -1.66
NEFMP07197 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NEFMP07197 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEFMP07197 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEFMP07197 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEFMP07197 RNU6-770P-201ENST00000363929 105 ntBASIC4.67□□□□□ -1.66
NEFMP07197 RNU6-76P-201ENST00000384060 104 ntBASIC4.67□□□□□ -1.66
NEFMP07197 SNORA51.11-201ENST00000384442 131 ntBASIC4.67□□□□□ -1.66
NEFMP07197 Y_RNA.534-201ENST00000384599 112 ntBASIC4.67□□□□□ -1.66
NEFMP07197 MTCO3P19-201ENST00000415864 321 ntBASIC4.67□□□□□ -1.66
NEFMP07197 AL353621.1-201ENST00000418219 243 ntBASIC4.67□□□□□ -1.66
NEFMP07197 AC139712.2-201ENST00000424302 339 ntBASIC4.67□□□□□ -1.66
NEFMP07197 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.67□□□□□ -1.66
NEFMP07197 AC008716.1-201ENST00000511084 513 ntBASIC4.67□□□□□ -1.66
NEFMP07197 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.67□□□□□ -1.66
NEFMP07197 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.67□□□□□ -1.66
NEFMP07197 MIR3944-201ENST00000581277 108 ntBASIC4.67□□□□□ -1.66
NEFMP07197 MIR3922-201ENST00000585192 84 ntBASIC4.67□□□□□ -1.66
NEFMP07197 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.67□□□□□ -1.66
NEFMP07197 AC006023.2-201ENST00000609916 167 ntBASIC4.67□□□□□ -1.66
NEFMP07197 AC012314.7-201ENST00000619693 93 ntBASIC4.67□□□□□ -1.66
NEFMP07197 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.67□□□□□ -1.66
NEFMP07197 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.66□□□□□ -1.66
NEFMP07197 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEFMP07197 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEFMP07197 SNORA71.3-201ENST00000362582 128 ntBASIC4.66□□□□□ -1.66
NEFMP07197 SAR1AP2-201ENST00000392696 594 ntBASIC4.66□□□□□ -1.66
NEFMP07197 RNU6-325P-201ENST00000411132 105 ntBASIC4.66□□□□□ -1.66
NEFMP07197 AC063979.1-201ENST00000415539 377 ntBASIC4.66□□□□□ -1.66
NEFMP07197 CRYBB2P1-203ENST00000415709 538 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms