Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RPL7P20-201ENST00000520308 745 ntBASIC2.54□□□□□ -2
CLDN1O95832 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.54□□□□□ -2
CLDN1O95832 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.54□□□□□ -2
CLDN1O95832 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN1O95832 AC023050.3-201ENST00000541142 333 ntBASIC2.54□□□□□ -2
CLDN1O95832 AC107016.2-201ENST00000547968 190 ntBASIC2.54□□□□□ -2
CLDN1O95832 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.54□□□□□ -2
CLDN1O95832 MIR3941-201ENST00000582572 103 ntBASIC2.54□□□□□ -2
CLDN1O95832 MIR3609-201ENST00000582661 80 ntBASIC2.54□□□□□ -2
CLDN1O95832 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
CLDN1O95832 AC022306.2-201ENST00000617563 647 ntBASIC2.54□□□□□ -2
CLDN1O95832 AL136221.1-201ENST00000621449 509 ntBASIC2.54□□□□□ -2
CLDN1O95832 AL008636.1-201ENST00000625038 1018 ntBASIC2.54□□□□□ -2
CLDN1O95832 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.54□□□□□ -2
CLDN1O95832 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
CLDN1O95832 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
CLDN1O95832 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.53□□□□□ -2
CLDN1O95832 ZNF658B-202ENST00000615961 3375 ntBASIC2.53□□□□□ -2
CLDN1O95832 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
CLDN1O95832 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLDN1O95832 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CLDN1O95832 RNU6-778P-201ENST00000363269 103 ntBASIC2.53□□□□□ -2
CLDN1O95832 SNORA72.1-201ENST00000363485 129 ntBASIC2.53□□□□□ -2
CLDN1O95832 Y_RNA.160-201ENST00000363677 92 ntBASIC2.53□□□□□ -2
CLDN1O95832 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLDN1O95832 RNU6-876P-201ENST00000391295 104 ntBASIC2.53□□□□□ -2
CLDN1O95832 MIR888-201ENST00000401186 77 ntBASIC2.53□□□□□ -2
CLDN1O95832 RNU2-3P-201ENST00000410144 191 ntBASIC2.53□□□□□ -2
CLDN1O95832 RNU4-26P-201ENST00000410270 107 ntBASIC2.53□□□□□ -2
CLDN1O95832 RNU6-1025P-201ENST00000410629 104 ntBASIC2.53□□□□□ -2
CLDN1O95832 Y_RNA.615-201ENST00000410769 117 ntBASIC2.53□□□□□ -2
CLDN1O95832 POLHP1-201ENST00000411806 470 ntBASIC2.53□□□□□ -2
CLDN1O95832 IFNA11P-201ENST00000446352 526 ntBASIC2.53□□□□□ -2
CLDN1O95832 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.53□□□□□ -2
CLDN1O95832 AC026801.1-201ENST00000497178 464 ntBASIC2.53□□□□□ -2
CLDN1O95832 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
CLDN1O95832 RNU6-189P-201ENST00000516120 101 ntBASIC2.53□□□□□ -2
CLDN1O95832 RNU6-1314P-201ENST00000517139 104 ntBASIC2.53□□□□□ -2
CLDN1O95832 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN1O95832 PSMA3P-201ENST00000555485 635 ntBASIC2.53□□□□□ -2
CLDN1O95832 MIR5692A1-201ENST00000580523 69 ntBASIC2.53□□□□□ -2
CLDN1O95832 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.53□□□□□ -2
CLDN1O95832 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
CLDN1O95832 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.53□□□□□ -2
CLDN1O95832 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
CLDN1O95832 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN1O95832 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CLDN1O95832 MIR412-201ENST00000362142 91 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 Y_RNA.166-201ENST00000363730 102 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN1O95832 RNU6-1027P-201ENST00000383998 107 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AL162578.1-201ENST00000406202 378 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 RPL26P27-201ENST00000414397 437 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN1O95832 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 AL513185.2-201ENST00000425543 193 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 SKA2P1-201ENST00000425592 390 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC098614.2-201ENST00000426040 255 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AL590639.1-201ENST00000456484 337 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN1O95832 AL031183.1-201ENST00000457667 207 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC011005.2-201ENST00000487324 359 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 RN7SL633P-201ENST00000488974 297 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC139453.3-201ENST00000493276 369 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 RPS29P21-201ENST00000496272 170 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN1O95832 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 DNAJC8P1-201ENST00000554535 372 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC015712.3-201ENST00000559380 164 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 VN1R80P-201ENST00000597126 338 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC012119.1-201ENST00000603184 222 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 U2.17-201ENST00000611454 95 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC007318.2-201ENST00000620999 243 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC090617.7-201ENST00000623952 126 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 AC009033.1-201ENST00000624279 431 ntBASIC2.52□□□□□ -2.01
CLDN1O95832 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN1O95832 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN1O95832 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN1O95832 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN1O95832 SNORD3E-201ENST00000362899 217 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 SNORD14B-201ENST00000364533 90 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 Y_RNA.530-201ENST00000384587 101 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 MIR764-201ENST00000390811 85 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RNA5SP247-201ENST00000411181 105 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 CYCSP33-201ENST00000414485 327 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN1O95832 RPL21P90-201ENST00000415692 466 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 AC009161.1-201ENST00000417306 376 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.51□□□□□ -2.01
CLDN1O95832 RPL21P2-201ENST00000440049 481 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms