Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.66□□□□□ -1.98
GGPS1O95749 AC079598.5-201ENST00000547460 117 ntBASIC2.66□□□□□ -1.98
GGPS1O95749 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.66□□□□□ -1.98
GGPS1O95749 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.66□□□□□ -1.98
GGPS1O95749 MIR4703-201ENST00000577728 79 ntBASIC2.66□□□□□ -1.98
GGPS1O95749 MIR5571-201ENST00000577998 113 ntBASIC2.66□□□□□ -1.98
GGPS1O95749 AC008945.2-201ENST00000606056 604 ntBASIC2.66□□□□□ -1.98
GGPS1O95749 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.66□□□□□ -1.98
GGPS1O95749 HMGB1P24-202ENST00000615653 685 ntBASIC2.66□□□□□ -1.98
GGPS1O95749 MIR6715A-201ENST00000615929 79 ntBASIC2.66□□□□□ -1.98
GGPS1O95749 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.98
GGPS1O95749 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
GGPS1O95749 RNU6-858P-201ENST00000362436 107 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 Y_RNA.359-201ENST00000365498 102 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
GGPS1O95749 BTF3P7-201ENST00000407097 488 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 MTATP6P18-201ENST00000417994 673 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 CALM1P1-201ENST00000442082 433 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 Y_RNA.687-201ENST00000516558 91 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.65□□□□□ -1.99
GGPS1O95749 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
GGPS1O95749 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.65□□□□□ -1.99
GGPS1O95749 AC025449.1-201ENST00000603896 529 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
GGPS1O95749 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.65□□□□□ -1.99
GGPS1O95749 MIR3529-201ENST00000637713 78 ntBASIC2.65□□□□□ -1.99
GGPS1O95749 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
GGPS1O95749 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
GGPS1O95749 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
GGPS1O95749 AL133475.1-201ENST00000404414 305 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.64□□□□□ -1.99
GGPS1O95749 RNU6-607P-201ENST00000411283 108 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.64□□□□□ -1.99
GGPS1O95749 AL356320.1-201ENST00000429616 163 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 AC010095.1-201ENST00000443543 144 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.64□□□□□ -1.99
GGPS1O95749 AL353705.4-201ENST00000449661 238 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 AC112771.1-201ENST00000463581 102 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 GMFBP1-201ENST00000467831 427 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 MTND3P25-201ENST00000509243 135 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 AC104136.1-201ENST00000512969 394 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 SMURF2P1-201ENST00000514992 481 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.64□□□□□ -1.99
GGPS1O95749 LRRC37A5P-203ENST00000580181 585 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 AC104984.5-201ENST00000586878 94 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 RPS15AP11-201ENST00000594193 385 ntBASIC2.64□□□□□ -1.99
GGPS1O95749 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.64□□□□□ -1.99
GGPS1O95749 HAUS6P2-201ENST00000433254 2404 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
GGPS1O95749 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.63□□□□□ -1.99
GGPS1O95749 OR4G2P-201ENST00000328113 903 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RNU6-1120P-201ENST00000362988 108 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 Y_RNA.159-201ENST00000363674 87 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RNU1-91P-201ENST00000364746 163 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RNU6-715P-201ENST00000365204 103 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
GGPS1O95749 RNU6-1103P-201ENST00000384150 107 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RNU6-843P-201ENST00000384454 104 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RNU6-45P-201ENST00000384471 107 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
GGPS1O95749 DEFB108C-201ENST00000400154 252 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RAP1BP3-201ENST00000407180 549 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RNU2-9P-201ENST00000410194 145 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.63□□□□□ -1.99
GGPS1O95749 PGBD4P6-201ENST00000421501 610 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RPS3AP44-201ENST00000425466 790 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 TOMM20P4-201ENST00000427861 435 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 MTND1P18-201ENST00000448191 573 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RPL23AP49-201ENST00000492925 468 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 AC079382.1-201ENST00000493346 557 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.63□□□□□ -1.99
GGPS1O95749 AC010493.1-201ENST00000513479 292 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.63□□□□□ -1.99
GGPS1O95749 SNORA25.11-201ENST00000515935 105 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.63□□□□□ -1.99
GGPS1O95749 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.63□□□□□ -1.99
GGPS1O95749 CR383656.8-201ENST00000549046 145 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 MTCYBP33-201ENST00000575007 1130 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 MIR3611-201ENST00000584484 83 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 NBR2-204ENST00000587322 63 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 BNIP3P30-201ENST00000601184 574 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 AC067747.1-201ENST00000608026 250 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 AC245008.1-201ENST00000608123 476 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.63□□□□□ -1.99
GGPS1O95749 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.63□□□□□ -1.99
GGPS1O95749 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.63□□□□□ -1.99
GGPS1O95749 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
GGPS1O95749 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.63□□□□□ -1.99
GGPS1O95749 ZNF680P1-201ENST00000436625 1469 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 RBBP8P1-201ENST00000449447 1844 ntBASIC2.63□□□□□ -1.99
GGPS1O95749 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms