Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
ABCA1O95477 RNU6-1300P-201ENST00000391046 108 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 RNU2-48P-201ENST00000410694 191 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 RPL36AP53-201ENST00000432891 316 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.58□□□□□ -2.32
ABCA1O95477 SNORD116-28-201ENST00000516123 91 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.58□□□□□ -2.32
ABCA1O95477 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.58□□□□□ -2.32
ABCA1O95477 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 MIR3167-201ENST00000579623 85 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 AL355598.1-201ENST00000604169 202 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 AL022345.1-201ENST00000607292 135 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
ABCA1O95477 LINC02555-201ENST00000563933 1951 ntBASIC0.58□□□□□ -2.32
ABCA1O95477 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 RNU6-288P-201ENST00000363690 104 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 RNU6-414P-201ENST00000363705 104 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC083875.1-201ENST00000419509 405 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.57□□□□□ -2.32
ABCA1O95477 RNU6-775P-201ENST00000459318 96 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.57□□□□□ -2.32
ABCA1O95477 AC079140.2-201ENST00000506193 142 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.57□□□□□ -2.32
ABCA1O95477 LRRC34P2-201ENST00000514850 553 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 SNORA25.11-201ENST00000515935 105 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 RNU6-714P-201ENST00000516963 103 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.57□□□□□ -2.32
ABCA1O95477 MIR4782-201ENST00000577987 79 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC008751.2-201ENST00000597885 980 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC087045.1-201ENST00000605856 382 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.57□□□□□ -2.32
ABCA1O95477 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
ABCA1O95477 AL118508.4-201ENST00000624142 1176 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC099654.5-201ENST00000636479 350 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 NACAP2-201ENST00000318548 624 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 SNRPEP3-201ENST00000338402 276 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 SNORD56.4-201ENST00000363883 71 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 RNU2-70P-201ENST00000410718 179 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC013410.2-201ENST00000422627 201 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.57□□□□□ -2.32
ABCA1O95477 PRELID3BP1-201ENST00000457142 540 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC005908.1-201ENST00000468701 347 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.57□□□□□ -2.32
ABCA1O95477 AP003392.2-201ENST00000527269 208 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.57□□□□□ -2.32
ABCA1O95477 AC012213.3-201ENST00000577199 777 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.57□□□□□ -2.32
ABCA1O95477 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.57□□□□□ -2.32
ABCA1O95477 AC012065.4-201ENST00000602445 679 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 HSPE1P19-201ENST00000603327 295 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AF129408.1-201ENST00000608767 431 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 AC017037.3-201ENST00000625016 472 ntBASIC0.57□□□□□ -2.32
ABCA1O95477 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.57□□□□□ -2.32
ABCA1O95477 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.56□□□□□ -2.32
ABCA1O95477 SNORD33-201ENST00000362761 85 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 SNORD115-3-201ENST00000363100 82 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.56□□□□□ -2.32
ABCA1O95477 UBE2FP1-201ENST00000416536 447 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 RPL39P29-201ENST00000447779 157 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 AC112492.4-201ENST00000456549 352 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 AC013267.1-201ENST00000458227 267 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 PTP4A1P4-201ENST00000512479 322 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 SNORA76.2-201ENST00000517095 137 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.56□□□□□ -2.32
ABCA1O95477 AC009237.15-201ENST00000610252 501 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.56□□□□□ -2.32
ABCA1O95477 AC104820.1-201ENST00000624183 307 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 AP003485.1-201ENST00000625093 753 ntBASIC0.56□□□□□ -2.32
ABCA1O95477 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.56□□□□□ -2.32
ABCA1O95477 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
ABCA1O95477 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 Y_RNA.518-201ENST00000384552 113 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 MIR506-201ENST00000384998 124 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
ABCA1O95477 MIR1262-201ENST00000408276 93 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 RNU2-42P-201ENST00000410697 113 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 TPMTP2-201ENST00000414372 726 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 UBE2V1P4-201ENST00000425374 344 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 USP9YP17-201ENST00000444617 696 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC012308.1-201ENST00000451232 178 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 OR6C5P-201ENST00000452388 923 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA1O95477 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.55□□□□□ -2.32
ABCA1O95477 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.55□□□□□ -2.32
ABCA1O95477 RNA5SP165-201ENST00000517142 115 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.55□□□□□ -2.32
ABCA1O95477 AC073544.2-201ENST00000601155 540 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC091152.3-201ENST00000604227 325 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AL583856.2-201ENST00000606298 543 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 uc_338.15-201ENST00000615470 191 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 RNU6-942P-201ENST00000363002 107 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 SNORD115-48-201ENST00000364764 76 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 SNORD1A-201ENST00000364968 72 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 MIR146A-201ENST00000385201 99 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 MTCYBP38-201ENST00000417160 1123 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 MTCYBP15-201ENST00000433123 1127 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 MRPL42P4-201ENST00000453267 443 ntBASIC0.55□□□□□ -2.32
ABCA1O95477 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms