Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.24□□□□□ -2.05
SDC3O75056 AC012213.3-201ENST00000577199 777 ntBASIC2.24□□□□□ -2.05
SDC3O75056 MIR4775-201ENST00000581168 75 ntBASIC2.24□□□□□ -2.05
SDC3O75056 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SDC3O75056 AC025754.2-201ENST00000606491 432 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.24□□□□□ -2.05
SDC3O75056 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.24□□□□□ -2.05
SDC3O75056 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SDC3O75056 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
SDC3O75056 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
SDC3O75056 SNORD114-1-201ENST00000362705 72 ntBASIC2.23□□□□□ -2.05
SDC3O75056 RNU6-181P-201ENST00000363225 107 ntBASIC2.23□□□□□ -2.05
SDC3O75056 SNORA64-201ENST00000384674 134 ntBASIC2.23□□□□□ -2.05
SDC3O75056 MIR578-201ENST00000384828 96 ntBASIC2.23□□□□□ -2.05
SDC3O75056 MIR221-201ENST00000385135 110 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.23□□□□□ -2.05
SDC3O75056 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.23□□□□□ -2.05
SDC3O75056 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.23□□□□□ -2.05
SDC3O75056 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.23□□□□□ -2.05
SDC3O75056 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.23□□□□□ -2.05
SDC3O75056 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.23□□□□□ -2.05
SDC3O75056 MTCO1P19-201ENST00000443487 500 ntBASIC2.23□□□□□ -2.05
SDC3O75056 RPL7P12-201ENST00000446719 750 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AL360271.2-201ENST00000447710 161 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC132479.1-201ENST00000449160 144 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.23□□□□□ -2.05
SDC3O75056 KLF3P2-201ENST00000465138 268 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC011005.2-201ENST00000487324 359 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC010424.1-201ENST00000506336 297 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.23□□□□□ -2.05
SDC3O75056 SMURF2P1-201ENST00000514992 481 ntBASIC2.23□□□□□ -2.05
SDC3O75056 RNU6-445P-201ENST00000516949 107 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.23□□□□□ -2.05
SDC3O75056 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SDC3O75056 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.23□□□□□ -2.05
SDC3O75056 AC026464.5-201ENST00000562497 722 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC092325.1-201ENST00000566449 554 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC119751.7-201ENST00000600494 245 ntBASIC2.23□□□□□ -2.05
SDC3O75056 DEFB131E-202ENST00000602581 683 ntBASIC2.23□□□□□ -2.05
SDC3O75056 SNORD14A-201ENST00000606526 91 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.23□□□□□ -2.05
SDC3O75056 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SDC3O75056 U6.42-201ENST00000618440 107 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC009509.4-201ENST00000619202 509 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC011155.2-201ENST00000623202 216 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC138627.2-201ENST00000624202 601 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC009161.2-201ENST00000624626 138 ntBASIC2.23□□□□□ -2.05
SDC3O75056 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
SDC3O75056 AL390237.1-201ENST00000404226 1415 ntBASIC2.23□□□□□ -2.05
SDC3O75056 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SDC3O75056 HSPA8P4-201ENST00000511877 1920 ntBASIC2.23□□□□□ -2.05
SDC3O75056 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.23□□□□□ -2.05
SDC3O75056 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SDC3O75056 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SDC3O75056 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SDC3O75056 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SDC3O75056 SNORD3E-201ENST00000362899 217 ntBASIC2.22□□□□□ -2.05
SDC3O75056 SNORD14B-201ENST00000364533 90 ntBASIC2.22□□□□□ -2.05
SDC3O75056 RNU1-51P-201ENST00000365345 176 ntBASIC2.22□□□□□ -2.05
SDC3O75056 U8.8-201ENST00000365399 135 ntBASIC2.22□□□□□ -2.05
SDC3O75056 SNORD116-1-201ENST00000384335 95 ntBASIC2.22□□□□□ -2.05
SDC3O75056 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
SDC3O75056 MIR1-2-201ENST00000384961 85 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AL079342.1-201ENST00000401460 267 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AL133475.1-201ENST00000404414 305 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.22□□□□□ -2.05
SDC3O75056 OR6C66P-201ENST00000414917 930 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.22□□□□□ -2.05
SDC3O75056 MTCO2P16-201ENST00000436962 677 ntBASIC2.22□□□□□ -2.05
SDC3O75056 Z83846.1-201ENST00000446798 265 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AC104058.1-201ENST00000448028 297 ntBASIC2.22□□□□□ -2.05
SDC3O75056 C1DP4-201ENST00000455429 424 ntBASIC2.22□□□□□ -2.05
SDC3O75056 RNU7-182P-201ENST00000459009 62 ntBASIC2.22□□□□□ -2.05
SDC3O75056 CKS1BP2-201ENST00000497342 240 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AC104806.1-201ENST00000508720 308 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AC107222.1-201ENST00000510899 637 ntBASIC2.22□□□□□ -2.05
SDC3O75056 OR5AL2P-201ENST00000532185 920 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AL133241.1-201ENST00000556832 487 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AC105137.2-201ENST00000569073 466 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AL391840.1-201ENST00000571144 367 ntBASIC2.22□□□□□ -2.05
SDC3O75056 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
SDC3O75056 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.22□□□□□ -2.05
SDC3O75056 RNU6-91P-201ENST00000607774 107 ntBASIC2.22□□□□□ -2.05
SDC3O75056 uc_338.11-201ENST00000619132 160 ntBASIC2.22□□□□□ -2.05
SDC3O75056 AC010378.1-201ENST00000619270 362 ntBASIC2.22□□□□□ -2.05
SDC3O75056 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.22□□□□□ -2.05
SDC3O75056 AL359740.1-201ENST00000624340 592 ntBASIC2.22□□□□□ -2.05
SDC3O75056 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SDC3O75056 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SDC3O75056 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SDC3O75056 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
SDC3O75056 RNU4-48P-201ENST00000365559 182 ntBASIC2.21□□□□□ -2.06
SDC3O75056 CIR1P3-201ENST00000405137 479 ntBASIC2.21□□□□□ -2.06
SDC3O75056 U3.37-201ENST00000408528 213 ntBASIC2.21□□□□□ -2.06
SDC3O75056 RNA5SP111-201ENST00000411386 101 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AF274854.1-201ENST00000413236 615 ntBASIC2.21□□□□□ -2.06
SDC3O75056 CDK8P2-201ENST00000415020 547 ntBASIC2.21□□□□□ -2.06
SDC3O75056 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms