Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CACNA1FO60840 RPS15AP27-201ENST00000449183 343 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 SNRPFP3-201ENST00000457792 225 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.72□□□□□ -1.97
CACNA1FO60840 SNORA19.2-201ENST00000516013 114 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 SNORD27.1-201ENST00000516319 72 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 SCARNA24.1-201ENST00000516465 137 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 IGKV2D-36-201ENST00000518643 226 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 MTND4P7-201ENST00000523876 130 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.72□□□□□ -1.97
CACNA1FO60840 AC105224.1-201ENST00000587055 421 ntBASIC2.72□□□□□ -1.97
CACNA1FO60840 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.72□□□□□ -1.97
CACNA1FO60840 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.72□□□□□ -1.97
CACNA1FO60840 ZNF734P-201ENST00000419494 1534 ntBASIC2.71□□□□□ -1.97
CACNA1FO60840 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CACNA1FO60840 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CACNA1FO60840 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.71□□□□□ -1.98
CACNA1FO60840 Y_RNA.22-201ENST00000362492 102 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 Y_RNA.146-201ENST00000363549 102 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 RNU6-288P-201ENST00000363690 104 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 RNU6-116P-201ENST00000384042 109 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 RNU6-692P-201ENST00000384496 107 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AL590004.1-201ENST00000405321 300 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 RPS20P15-201ENST00000412792 311 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 MTND3P8-201ENST00000412909 339 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.71□□□□□ -1.98
CACNA1FO60840 MTATP6P16-201ENST00000434543 526 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AC236972.2-201ENST00000434979 310 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AL356010.1-201ENST00000456364 102 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 UBL5P3-201ENST00000475112 231 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AC104806.1-201ENST00000508720 308 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.71□□□□□ -1.98
CACNA1FO60840 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.71□□□□□ -1.98
CACNA1FO60840 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.71□□□□□ -1.98
CACNA1FO60840 MIR4293-201ENST00000584305 78 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AC005034.5-201ENST00000604219 466 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AL050343.2-201ENST00000607338 280 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 AC104237.2-201ENST00000612456 443 ntBASIC2.71□□□□□ -1.98
CACNA1FO60840 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CACNA1FO60840 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CACNA1FO60840 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CACNA1FO60840 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.71□□□□□ -1.98
CACNA1FO60840 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CACNA1FO60840 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.71□□□□□ -1.98
CACNA1FO60840 RNU6-552P-201ENST00000362869 119 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 Y_RNA.67-201ENST00000362870 100 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 SNORA63-201ENST00000363450 132 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 RNU6-61P-201ENST00000365528 109 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 RNU6-701P-201ENST00000384059 107 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 MIR221-201ENST00000385135 110 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AC009161.1-201ENST00000417306 376 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 Z98742.3-201ENST00000418637 326 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 ARL5AP1-201ENST00000418991 388 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 NCOR1P3-201ENST00000420479 303 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AF228730.4-201ENST00000421457 183 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 ERLEC1P1-201ENST00000433806 578 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.7□□□□□ -1.98
CACNA1FO60840 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.7□□□□□ -1.98
CACNA1FO60840 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.7□□□□□ -1.98
CACNA1FO60840 AC104435.1-201ENST00000483483 166 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 Y_RNA.654-201ENST00000497848 106 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 RNU6-1073P-201ENST00000517182 106 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 BTF3P12-201ENST00000519620 469 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AC024619.4-201ENST00000580924 316 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AP001429.1-201ENST00000602568 530 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AL161431.1-201ENST00000618966 4205 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 ZNF271P-202ENST00000465539 1970 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CACNA1FO60840 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CACNA1FO60840 MTND5P7-201ENST00000413558 1798 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 Y_RNA.100-201ENST00000363141 102 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CACNA1FO60840 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CACNA1FO60840 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.7□□□□□ -1.98
CACNA1FO60840 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.7□□□□□ -1.98
CACNA1FO60840 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.7□□□□□ -1.98
CACNA1FO60840 AC018630.2-202ENST00000422992 927 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.7□□□□□ -1.98
CACNA1FO60840 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.7□□□□□ -1.98
CACNA1FO60840 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.7□□□□□ -1.98
CACNA1FO60840 RNU7-182P-201ENST00000459009 62 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 MTND4P17-201ENST00000470444 350 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 RNU6-835P-201ENST00000516974 104 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 OR4T1P-201ENST00000554933 911 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AL450472.3-201ENST00000615578 367 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CACNA1FO60840 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
CACNA1FO60840 AC090740.1-201ENST00000623193 2262 ntBASIC2.7□□□□□ -1.98
CACNA1FO60840 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CACNA1FO60840 Y_RNA.138-201ENST00000363462 102 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 RNU6-511P-201ENST00000363496 107 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CACNA1FO60840 Y_RNA.460-201ENST00000384255 102 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 RNU2-29P-201ENST00000410423 189 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.69□□□□□ -1.98
CACNA1FO60840 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1FO60840 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.69□□□□□ -1.98
CACNA1FO60840 AC233279.1-201ENST00000455300 423 ntBASIC2.69□□□□□ -1.98
CACNA1FO60840 RPS29P21-201ENST00000496272 170 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms