Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU6-908P-201ENST00000410160 94 ntBASIC2.46□□□□□ -2.02
SNX3O60493 HMGB1P31-201ENST00000437242 427 ntBASIC2.46□□□□□ -2.02
SNX3O60493 FABP5P14-201ENST00000437273 393 ntBASIC2.46□□□□□ -2.02
SNX3O60493 SEPT14P3-201ENST00000439401 183 ntBASIC2.46□□□□□ -2.02
SNX3O60493 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.46□□□□□ -2.02
SNX3O60493 AL732372.2-207ENST00000445840 183 ntBASIC2.46□□□□□ -2.02
SNX3O60493 MTND3P16-201ENST00000452205 344 ntBASIC2.46□□□□□ -2.02
SNX3O60493 PRSS3P4-201ENST00000453323 162 ntBASIC2.46□□□□□ -2.02
SNX3O60493 SEPT14P2-201ENST00000453405 183 ntBASIC2.46□□□□□ -2.02
SNX3O60493 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX3O60493 AL441985.1-201ENST00000457727 251 ntBASIC2.46□□□□□ -2.02
SNX3O60493 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.46□□□□□ -2.02
SNX3O60493 MED28P2-201ENST00000475771 317 ntBASIC2.46□□□□□ -2.02
SNX3O60493 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.46□□□□□ -2.02
SNX3O60493 SEPT14P4-201ENST00000513445 186 ntBASIC2.46□□□□□ -2.02
SNX3O60493 SNORA43.2-201ENST00000516652 128 ntBASIC2.46□□□□□ -2.02
SNX3O60493 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.46□□□□□ -2.02
SNX3O60493 FO082796.1-201ENST00000523795 183 ntBASIC2.46□□□□□ -2.02
SNX3O60493 AP002404.1-201ENST00000532005 451 ntBASIC2.46□□□□□ -2.02
SNX3O60493 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
SNX3O60493 AL157687.1-201ENST00000554853 619 ntBASIC2.46□□□□□ -2.02
SNX3O60493 AL118558.2-201ENST00000556294 238 ntBASIC2.46□□□□□ -2.02
SNX3O60493 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.46□□□□□ -2.02
SNX3O60493 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
SNX3O60493 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.46□□□□□ -2.02
SNX3O60493 U2.17-201ENST00000611454 95 ntBASIC2.46□□□□□ -2.02
SNX3O60493 AC138627.2-201ENST00000624202 601 ntBASIC2.46□□□□□ -2.02
SNX3O60493 Z69720.2-201ENST00000624755 279 ntBASIC2.46□□□□□ -2.02
SNX3O60493 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.46□□□□□ -2.02
SNX3O60493 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SNX3O60493 AL109809.4-201ENST00000603520 2185 ntBASIC2.46□□□□□ -2.02
SNX3O60493 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SNX3O60493 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.45□□□□□ -2.02
SNX3O60493 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.45□□□□□ -2.02
SNX3O60493 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SNX3O60493 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SNX3O60493 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.45□□□□□ -2.02
SNX3O60493 AC080128.1-201ENST00000474389 1917 ntBASIC2.45□□□□□ -2.02
SNX3O60493 Y_RNA.38-201ENST00000362617 102 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-37P-201ENST00000362692 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-266P-201ENST00000364225 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-11P-201ENST00000364234 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-7-201ENST00000364784 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU1-51P-201ENST00000365345 176 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-8-201ENST00000365467 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-25P-201ENST00000383873 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-1-201ENST00000383898 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 SNORA18.3-201ENST00000384122 132 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-48P-201ENST00000384161 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-36P-201ENST00000384172 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-4P-201ENST00000384205 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-5P-201ENST00000384238 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-3P-201ENST00000384314 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-16P-201ENST00000384385 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 SNORD116-20-201ENST00000384529 92 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-15P-201ENST00000384534 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-2-201ENST00000384627 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-29P-201ENST00000384637 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNVU1-14-201ENST00000384770 164 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-9-201ENST00000384776 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-33P-201ENST00000384793 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-192P-201ENST00000391253 100 ntBASIC2.45□□□□□ -2.02
SNX3O60493 MIR548F1-201ENST00000408667 84 ntBASIC2.45□□□□□ -2.02
SNX3O60493 MTCO1P20-201ENST00000425366 358 ntBASIC2.45□□□□□ -2.02
SNX3O60493 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.45□□□□□ -2.02
SNX3O60493 YME1L1P1-201ENST00000429435 297 ntBASIC2.45□□□□□ -2.02
SNX3O60493 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.45□□□□□ -2.02
SNX3O60493 AC002456.2-201ENST00000509356 380 ntBASIC2.45□□□□□ -2.02
SNX3O60493 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.45□□□□□ -2.02
SNX3O60493 RNU5B-3P-201ENST00000516601 115 ntBASIC2.45□□□□□ -2.02
SNX3O60493 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.45□□□□□ -2.02
SNX3O60493 AC243972.3-201ENST00000539655 198 ntBASIC2.45□□□□□ -2.02
SNX3O60493 CR383656.8-201ENST00000549046 145 ntBASIC2.45□□□□□ -2.02
SNX3O60493 AC090115.3-201ENST00000553218 849 ntBASIC2.45□□□□□ -2.02
SNX3O60493 OR11H5P-201ENST00000554039 926 ntBASIC2.45□□□□□ -2.02
SNX3O60493 ZNF519P2-201ENST00000557032 169 ntBASIC2.45□□□□□ -2.02
SNX3O60493 MIR4765-201ENST00000585007 77 ntBASIC2.45□□□□□ -2.02
SNX3O60493 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.45□□□□□ -2.02
SNX3O60493 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.45□□□□□ -2.02
SNX3O60493 AC123912.5-201ENST00000605470 343 ntBASIC2.45□□□□□ -2.02
SNX3O60493 RNU6-6P-201ENST00000606623 107 ntBASIC2.45□□□□□ -2.02
SNX3O60493 AC004492.1-201ENST00000607036 742 ntBASIC2.45□□□□□ -2.02
SNX3O60493 AC084757.4-201ENST00000616350 526 ntBASIC2.45□□□□□ -2.02
SNX3O60493 U4.5-201ENST00000617137 123 ntBASIC2.45□□□□□ -2.02
SNX3O60493 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.45□□□□□ -2.02
SNX3O60493 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.45□□□□□ -2.02
SNX3O60493 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SNX3O60493 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.45□□□□□ -2.02
SNX3O60493 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
SNX3O60493 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.44□□□□□ -2.02
SNX3O60493 Y_RNA.6-201ENST00000362350 114 ntBASIC2.44□□□□□ -2.02
SNX3O60493 Y_RNA.9-201ENST00000362354 101 ntBASIC2.44□□□□□ -2.02
SNX3O60493 RNU6-78P-201ENST00000362897 107 ntBASIC2.44□□□□□ -2.02
SNX3O60493 RNU4-12P-201ENST00000365233 139 ntBASIC2.44□□□□□ -2.02
SNX3O60493 RNA5SP219-201ENST00000390940 113 ntBASIC2.44□□□□□ -2.02
SNX3O60493 NUP35P1-201ENST00000422734 947 ntBASIC2.44□□□□□ -2.02
SNX3O60493 AL139132.1-201ENST00000431587 344 ntBASIC2.44□□□□□ -2.02
SNX3O60493 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.44□□□□□ -2.02
SNX3O60493 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.44□□□□□ -2.02
SNX3O60493 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 525.5 ms