Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC018644.1-201ENST00000429934 551 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AC236972.2-201ENST00000434979 310 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AL133547.1-201ENST00000448546 220 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.31□□□□□ -1.88
PHGDHO43175 AC107626.1-201ENST00000471084 183 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 RNU5F-8P-201ENST00000515941 111 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.31□□□□□ -1.88
PHGDHO43175 DNAJC8P1-201ENST00000554535 372 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.31□□□□□ -1.88
PHGDHO43175 SRGNP1-201ENST00000603392 451 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AC091152.3-201ENST00000604227 325 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AL133215.3-201ENST00000609801 448 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AL591516.1-201ENST00000611326 274 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PHGDHO43175 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.31□□□□□ -1.88
PHGDHO43175 AC008669.1-201ENST00000565823 2178 ntBASIC3.31□□□□□ -1.88
PHGDHO43175 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
PHGDHO43175 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 Y_RNA.394-201ENST00000383942 103 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 PTMAP2-201ENST00000397627 327 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 RPL21P23-201ENST00000446654 460 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 RBMY2UP-201ENST00000453474 324 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
PHGDHO43175 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.3□□□□□ -1.88
PHGDHO43175 FCF1P8-201ENST00000510322 597 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.3□□□□□ -1.88
PHGDHO43175 AC034105.4-201ENST00000568304 277 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.3□□□□□ -1.88
PHGDHO43175 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.3□□□□□ -1.88
PHGDHO43175 AL353621.2-201ENST00000605340 133 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 AC005046.1-201ENST00000608515 625 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 AC110079.1-202ENST00000635213 138 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 AL034408.1-202ENST00000636088 415 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 MTND4LP32-201ENST00000636111 270 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 MIR3529-201ENST00000637713 78 ntBASIC3.3□□□□□ -1.88
PHGDHO43175 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
PHGDHO43175 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PHGDHO43175 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
PHGDHO43175 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PHGDHO43175 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.29□□□□□ -1.88
PHGDHO43175 SNORD56.1-201ENST00000362913 68 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 Y_RNA.259-201ENST00000364619 101 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 RPS29P13-201ENST00000402041 169 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 AL513475.1-201ENST00000406602 315 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 RNU6-1245P-201ENST00000411130 106 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 AC074117.2-201ENST00000417130 397 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 ATG3P1-201ENST00000419507 911 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 MTCO2P27-201ENST00000420740 428 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.29□□□□□ -1.88
PHGDHO43175 Z82205.1-201ENST00000428456 297 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 AL441985.1-201ENST00000457727 251 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 RN7SL542P-201ENST00000467147 294 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 SNORA31.18-201ENST00000517043 134 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.29□□□□□ -1.88
PHGDHO43175 MIR3922-201ENST00000585192 84 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.29□□□□□ -1.88
PHGDHO43175 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.29□□□□□ -1.88
PHGDHO43175 AC018462.2-201ENST00000605375 395 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 AL133255.1-201ENST00000606374 441 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.29□□□□□ -1.88
PHGDHO43175 CR392039.5-201ENST00000623201 510 ntBASIC3.29□□□□□ -1.88
PHGDHO43175 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.29□□□□□ -1.88
PHGDHO43175 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.29□□□□□ -1.88
PHGDHO43175 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PHGDHO43175 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PHGDHO43175 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PHGDHO43175 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHGDHO43175 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.28□□□□□ -1.88
PHGDHO43175 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PHGDHO43175 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHGDHO43175 MIR148B-201ENST00000362252 99 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 RNU6-748P-201ENST00000384648 107 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 MIR147B-201ENST00000390185 80 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHGDHO43175 RNA5SP44-201ENST00000410446 133 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.28□□□□□ -1.88
PHGDHO43175 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.28□□□□□ -1.88
PHGDHO43175 AC009414.1-201ENST00000427200 443 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.28□□□□□ -1.88
PHGDHO43175 USP9YP30-201ENST00000430729 455 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.28□□□□□ -1.88
PHGDHO43175 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PHGDHO43175 DAP3P1-201ENST00000441522 278 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 SNORD19B-201ENST00000459623 84 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 AC093663.1-201ENST00000497190 394 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 GZMAP1-201ENST00000503054 631 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.28□□□□□ -1.88
PHGDHO43175 RAC1P5-201ENST00000512182 576 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 PTP4A1P4-201ENST00000512479 322 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
PHGDHO43175 RNU6-612P-201ENST00000516909 102 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 484.6 ms